G1405325


Basic Information

Item Value
gene id G1405325
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69698857 ~ 69699511 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1604992
GTATACATCCTTTAAACATGCTGTAAACATGCTGTAAACATGCTTTATACATGCTGTGAACATGCTGTAAACATGCTTTATACAGGCTGTAAACATGCTGTAAACATGCTGTGAACATCCTTTACACATGCTGTGAACATGCTGTAAACATGCTTTATACAGGCTGTAAACATGATGTAAACATGCTGTGAACATCCTTTAAACATGCTGTAAACATGCTGTAAACATGCTGTAAACATCCTTTACACATGCTGTGAACATGCTTTATACATGCTGTAAACATGCTGTAAACATGCTGTGAACATGCTGTAAACATGATGTAAACATCCTTTACACATGCTGTGAACATGCTTTATAC

Function

NR:

description
rho-related BTB domain-containing protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1604992 True 358 lncRNA 0.36 3 69698857 69699511

Neighbor

gene id symbol gene type direction distance location
LOC110492656 LOC106566444 coding upstream 2454 69693022 ~ 69696403 (+)
LOC118939480 NA coding upstream 270016 69428060 ~ 69428841 (+)
LOC110492642 LOC106566441 coding upstream 351302 69313323 ~ 69347555 (+)
fkbp1ab LOC100705189 coding upstream 386653 69305670 ~ 69312263 (+)
LOC110492640 mfsd2 coding upstream 393465 69289013 ~ 69305392 (+)
LOC110492659 LOC106566420 coding downstream 286666 69986177 ~ 69996398 (+)
LOC118939577 LOC106566421 coding downstream 343737 70043248 ~ 70069326 (+)
LOC110492657 hck coding downstream 379182 70078693 ~ 70095267 (+)
LOC110492652 LOC106566422 coding downstream 396938 70096449 ~ 70111837 (+)
LOC110492666 NA coding downstream 492281 70191792 ~ 70194430 (+)
G1405245 NA non-coding upstream 46541 69649747 ~ 69652316 (+)
G1405233 LOC106572122 non-coding upstream 56900 69625928 ~ 69641957 (+)
G1405240 NA non-coding upstream 59224 69638510 ~ 69639633 (+)
G1405214 NA non-coding upstream 125754 69572402 ~ 69573103 (+)
G1405203 NA non-coding upstream 156469 69542174 ~ 69542388 (+)
G1405331 NA non-coding downstream 4671 69704182 ~ 69704394 (+)
G1405344 NA non-coding downstream 39385 69738896 ~ 69768630 (+)
G1405349 NA non-coding downstream 48216 69747727 ~ 69748528 (+)
G1405352 NA non-coding downstream 58356 69757867 ~ 69759009 (+)
G1405356 NA non-coding downstream 65483 69764994 ~ 69765591 (+)
G1405310 LOC106566443 other upstream 26183 69671464 ~ 69672674 (+)
G1405218 NA other upstream 111951 69585989 ~ 69586906 (+)
G1405216 NA other upstream 115231 69580729 ~ 69583626 (+)
G1404827 NA other upstream 329481 69364521 ~ 69369376 (+)
G1405605 LOC106566425 other downstream 430410 70129921 ~ 70132301 (+)
G1405676 NA other downstream 557311 70256822 ~ 70257430 (+)
G1406381 NA other downstream 1270104 70969615 ~ 70972604 (+)
G1406424 NA other downstream 1502931 71202442 ~ 71206092 (+)
G1406505 NA other downstream 1510761 71210272 ~ 71210764 (+)

Expression


Co-expression Network