G1405499



Basic Information


Item Value
gene id G1405499
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69911739 ~ 69912241 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1605205
gtgtgtgtgtgtgtgtgtgtgtgtgtgatgccacACCGGGAACATTGGCTACCTAGTAATGCATTTTAAGAGGCTCACATTAATAAATTTGCCGTGAGTGTATTTTTCCTTATTAATGACCTCAGTGGCAAATCACAGCCTCTTTAATGCATTTCACTTAGTGTTGCTTATGAGTGTGTTTCATGAAACATGTCAGCTTTTAGACACATATTATTGGATGGAATGTATCCCTACTGTCCTACCCCACCCTCTTTCATACAGCCTCTAAAGCTTTTTGAACTTACAGATCTCTGCaggttttatttaacctttattcaaccaggttgccagttgagaacacctttatttaaccaggtaggccagttgagaacccctttatttaaccaggtagggtagttgagaacacctttattcaaccaggtaggccagttgagaacacctttatttaaccaggtagggtagttgagaacacctatattcaaccaggtaggccagttgagaac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1605205 True 503 lncRNA 0.41 1 69911739 69912241

Neighbor


gene id symbol gene type direction distance location
LOC110492656 LOC106566444 coding upstream 215336 69693022 ~ 69696403 (+)
LOC118939480 NA coding upstream 482898 69428060 ~ 69428841 (+)
LOC110492642 LOC106566441 coding upstream 564184 69313323 ~ 69347555 (+)
fkbp1ab LOC100705189 coding upstream 599535 69305670 ~ 69312263 (+)
LOC110492640 mfsd2 coding upstream 606347 69289013 ~ 69305392 (+)
LOC110492659 LOC106566420 coding downstream 73936 69986177 ~ 69996398 (+)
LOC118939577 LOC106566421 coding downstream 131007 70043248 ~ 70069326 (+)
LOC110492657 hck coding downstream 166452 70078693 ~ 70095267 (+)
LOC110492652 LOC106566422 coding downstream 184208 70096449 ~ 70111837 (+)
LOC110492666 NA coding downstream 279551 70191792 ~ 70194430 (+)
G1405493 NA non-coding upstream 4416 69907110 ~ 69907323 (+)
G1405481 NA non-coding upstream 28742 69882747 ~ 69882997 (+)
G1405480 NA non-coding upstream 30216 69881239 ~ 69881523 (+)
G1405360 NA non-coding upstream 99340 69805642 ~ 69812399 (+)
G1405366 NA non-coding upstream 114908 69795570 ~ 69796831 (+)
G1405511 NA non-coding downstream 11373 69923614 ~ 69923826 (+)
G1405540 NA non-coding downstream 45825 69958066 ~ 69958873 (+)
G1405545 NA non-coding downstream 53305 69965546 ~ 69965767 (+)
G1405569 NA non-coding downstream 105240 70017481 ~ 70018006 (+)
G1405575 NA non-coding downstream 122223 70034464 ~ 70037203 (+)
G1405310 LOC106566443 other upstream 239065 69671464 ~ 69672674 (+)
G1405218 NA other upstream 324833 69585989 ~ 69586906 (+)
G1405216 NA other upstream 328113 69580729 ~ 69583626 (+)
G1404827 NA other upstream 542363 69364521 ~ 69369376 (+)
G1405605 LOC106566425 other downstream 217680 70129921 ~ 70132301 (+)
G1405676 NA other downstream 344581 70256822 ~ 70257430 (+)
G1406381 NA other downstream 1057374 70969615 ~ 70972604 (+)
G1406424 NA other downstream 1290201 71202442 ~ 71206092 (+)
G1406505 NA other downstream 1298031 71210272 ~ 71210764 (+)

Expression


G1405499 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
End of interactive chart.

G1405499 Expression in each Bioproject

Bar chart with 9 bars.
G1405499 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 125.
End of interactive chart.

Co-expression Network