G1405907


Basic Information

Item Value
gene id G1405907
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70014596 ~ 70016156 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1605736
TGATCATAGTGGTGTATGTGTGGTGATGAATGGAATGGAGAGGGCAAGATAGTGGACATGGAGAAGGAGGTTTTAGATGGGGAATAGAGTAAGGGGTTGAAGGAGGTACTAGATGGGGAATAGAGTAGGGGGTTGAAGGAGGTATTAGATGGGGAATAGAGTAGGGGGTTTTGAAGGAGGTATTAGATGGGGAATAGAGCAGGGGGTTTTGAAGGAGGTATTAGATGGGGATTAGAGTAGGGGGGTTTTGAAGGAGGCATTAGATGGGGAATAGAGTAGGGGGGTTGAAGAAGGTATTAGATGGGGAATAGAGTAGGGGGGTTGAAGGAGGTATTAGATGGGGAATAGAGTAGGGGGGTTGAAGGAGGTATTGGATGGGGAATAGAGTAAGGTGTTTTGAAGGAGGTATTGGATGGGGAATAGAGTAGGGGGTTGAAGGAGGTATTAGATGGGGAATAGAGTAGGGGGTTGAAGGAGGTAGCCAATGATCATAGTGGTGTATGTGTGGTGATGAATGGAATGGAGAGGGCAAGATAGTGGACATGGAGAAGGAGGTTTTAGATGGAGAATAGAGTAAGGGGTTTTGAAGGAGGTATTAGATGGGGATTAGAGTAGGGGGGTTGAAGGAGGTACTAGATGGGGAATATAGTAGGGGTTGAAGGAGGTATTAGATGGGGAATAGAGTAGGGGGTTTTGAAGGAGGTATTAGATGGGGAATAGAGTAAGGGGTTTTGAAAGAGGTATTAGATGGGGAATAGAGTAAGGGGTTTTGAAGGAGGTATTAGATGGGGAATAGAGTAGGGGGGTTGAAGGAGGTATTGGATGGGGAATAGAGTAAGGTGTTTTGAAGGAGGTAGTGGATGGGGAATAGAGTAGGGGGTTGAAGGAGGTATTAGATGGGGAATAGAGTAGGGGGTTGAAGGAGGTATTAGATGGGGAATAGAGCAGGGGGTTTTGAAGGAGGTATTGGATGGGGAATAGAGTAAGGGGTTGAAGGAGGTTTTAGATGGGGAATAGAGTAGGGGGTTTGAAGGAGGTACTAGATGGGGAATAGAGTAGGGGGTTTTGAAGGAGGTTTTAGATGGGgaatagaatcaaatcaaatcaaattttatttgtcacatacacatggttagcagatgttaatgcaagtacagcgaaatgcttgtgcttctagttccgacaatgcagtaataaccaacaagtaatctagctaacaattccaaaactactaccttatagacacaagtgtaaggggataaagaatatgtacataaagatatatgaatgagtgatggtacagagcggcataggcaagatacagtagatggtattgagtgcagtatatacatatgagatgagtatgtaaacaaagtggcatagttaaagtggctagtgatacatgtattacataaagatgctgtagatgatatagagtacagtatatacg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1605736 True 1450 lncRNA 0.43 4 70014596 70016156

Neighbor

gene id symbol gene type direction distance location
LOC110491172 LOC106566442 coding downstream 348579 69577674 ~ 69666017 (-)
LOC118939576 NA coding downstream 438753 69571853 ~ 69575843 (-)
LOC110491170 LOC106566448 coding downstream 508580 69470416 ~ 69506016 (-)
LOC110492644 LOC106566447 coding downstream 635415 69354502 ~ 69379181 (-)
LOC110492636 LOC106566437 coding downstream 891130 69113016 ~ 69123466 (-)
LOC118936543 LOC106566425 coding upstream 111097 70127253 ~ 70133280 (-)
LOC118939578 NA coding upstream 169219 70185375 ~ 70187858 (-)
LOC110492660 LOC106566428 coding upstream 200382 70216538 ~ 70221552 (-)
LOC110492649 LOC106566409 coding upstream 213683 70229839 ~ 70282239 (-)
tmed4 LOC106566412 coding upstream 406273 70422429 ~ 70426035 (-)
G1405555 NA non-coding downstream 36785 69976709 ~ 69977811 (-)
G1405550 NA non-coding downstream 43837 69970516 ~ 69970759 (-)
G1405541 NA non-coding downstream 56126 69957915 ~ 69958470 (-)
G1405535 NA non-coding downstream 66174 69948102 ~ 69948422 (-)
G1405523 NA non-coding downstream 78809 69935538 ~ 69935787 (-)
G1405912 NA non-coding upstream 8543 70024699 ~ 70026485 (-)
G1405920 NA non-coding upstream 18568 70034724 ~ 70037391 (-)
G1405954 NA non-coding upstream 88696 70104852 ~ 70106962 (-)
G1405918 NA non-coding upstream 96743 70112899 ~ 70113881 (-)
G1405933 NA non-coding upstream 109895 70126051 ~ 70126294 (-)
G1405172 NA other downstream 496483 69517755 ~ 69518113 (-)
G1405016 nsfl1c other downstream 734237 69277827 ~ 69280359 (-)
G1404974 LOC106566438 other downstream 807438 69203286 ~ 69207158 (-)
LOC118939478 LOC106566484 other downstream 1219571 68791189 ~ 68795025 (-)
G1403498 NA other downstream 2570417 67443421 ~ 67444179 (-)
G1405917 NA other upstream 62501 70078657 ~ 70095541 (-)
G1406228 NA other upstream 719491 70735647 ~ 70742179 (-)
G1406514 NA other upstream 1244166 71260322 ~ 71260817 (-)
G1406752 NA other upstream 1486323 71501118 ~ 71547366 (-)

Expression


Co-expression Network