G1405912


Basic Information

Item Value
gene id G1405912
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70024699 ~ 70026485 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1605753
CTCTTTAGCATACTaatttactgtctctctctttagcatagtcatttactgtctctctctttagcatactcatttactgtctctctcttcagcATACTCATTTACTGTCTCTCTTTAGCATACTaatttactgtctctctctttagcatactcatttactgtctctctctttagcatactcatttactgtctctctttagcatactcatttactgtctctctctttagcatactcatttactgtctctctcttcagcATACtgatttactgtctctctctctttagcatactcatttactgtctctctctttagcatgctcatttactgtctctctctttagcatactcatttactgtctctctctttagcatactcatttactgtctctctttagcatactcatttactgtctctctttagcatactcatttactgtctctctctttagcatactcatttactgtctctctctttagaatactcatttactgtctctctctttagcaTACTCATTTACTGTCTCTCTTTAGCATACTaatttactgtctctctctttagcatactcatttactgtctctctctttagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1605753 True 589 lncRNA 0.35 2 70024699 70026485

Neighbor

gene id symbol gene type direction distance location
LOC110491172 LOC106566442 coding downstream 358682 69577674 ~ 69666017 (-)
LOC118939576 NA coding downstream 448856 69571853 ~ 69575843 (-)
LOC110491170 LOC106566448 coding downstream 518683 69470416 ~ 69506016 (-)
LOC110492644 LOC106566447 coding downstream 645518 69354502 ~ 69379181 (-)
LOC110492636 LOC106566437 coding downstream 901233 69113016 ~ 69123466 (-)
LOC118936543 LOC106566425 coding upstream 100768 70127253 ~ 70133280 (-)
LOC118939578 NA coding upstream 158890 70185375 ~ 70187858 (-)
LOC110492660 LOC106566428 coding upstream 190053 70216538 ~ 70221552 (-)
LOC110492649 LOC106566409 coding upstream 203354 70229839 ~ 70282239 (-)
tmed4 LOC106566412 coding upstream 395944 70422429 ~ 70426035 (-)
G1405907 NA non-coding downstream 8543 70014596 ~ 70016156 (-)
G1405555 NA non-coding downstream 46888 69976709 ~ 69977811 (-)
G1405550 NA non-coding downstream 53940 69970516 ~ 69970759 (-)
G1405541 NA non-coding downstream 66229 69957915 ~ 69958470 (-)
G1405535 NA non-coding downstream 76277 69948102 ~ 69948422 (-)
G1405920 NA non-coding upstream 8239 70034724 ~ 70037391 (-)
G1405954 NA non-coding upstream 78367 70104852 ~ 70106962 (-)
G1405918 NA non-coding upstream 86414 70112899 ~ 70113881 (-)
G1405933 NA non-coding upstream 99566 70126051 ~ 70126294 (-)
G1405919 NA non-coding upstream 108285 70134770 ~ 70135100 (-)
G1405172 NA other downstream 506586 69517755 ~ 69518113 (-)
G1405016 nsfl1c other downstream 744340 69277827 ~ 69280359 (-)
G1404974 LOC106566438 other downstream 817541 69203286 ~ 69207158 (-)
LOC118939478 LOC106566484 other downstream 1229674 68791189 ~ 68795025 (-)
G1403498 NA other downstream 2580520 67443421 ~ 67444179 (-)
G1405917 NA other upstream 52172 70078657 ~ 70095541 (-)
G1406228 NA other upstream 709162 70735647 ~ 70742179 (-)
G1406514 NA other upstream 1233837 71260322 ~ 71260817 (-)
G1406752 NA other upstream 1475994 71501118 ~ 71547366 (-)

Expression


Co-expression Network