G1405920


Basic Information

Item Value
gene id G1405920
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70034724 ~ 70037391 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1605778
GACTTCAGAGAAGAAGGCAGATTTACAAGACGCCTCAGAGGGCCTTTCAAATACTGCTGAGGAAATGTTTACGCAACATCATCTACGTCAGGCACAAGGGGATGGAAAAACATGCCTCTCAGTGCAGAACTGAACACTCTGGAGATTCATTGATAACTATAAATCTATCAGCAAGTTCTATTTCACTTCAAGGACTTTCATGGGCTTGTTAAAATCAGTCCTGGTCAGCCCGGACTGTCAGCTGCACTTTGAAAATATGAAACATACATCTCCACCGAGGCTTACACTGACACGGTTAGTCACTCTAATACACTGAGGCTGTTAGTCACTCTAATACACTGACACGGTTAGTCACTCTAATACACTGAGGCTGTTAGTCACTCTAATACACTGAGGCTGTTAGTCACTCTAATACACTGACACGGTTAGTCACTCTAATACACTGACACGGTTAGTCACTCTAATACACTGACACGGTTAGTCACTCTAATACACTGACACGGTTAGTCACTCTAATACACTGACACGGTTAGTCATTCTAATACACTGAGACTGTTAGTCACTCTAATACACTGACACGGTTAGTCACTCTAATACACTGACACGGCAAGTCACTCTAATACACTGACACGGTTAGTCACTCTAATACACTGACACAGTTAGTCACTCTAATACACTGACACGGTTAGTCACTCTAATACACTGACACGGTTAGTCACTCTAATACACTGACACGGTTAGTCACTCTAAAAAACTGACATGGTTAGTCACTCTAATACACTGAGGCTGTTAGTTACTCTAATACACTGACACGGTTAGTCACTCTAATACACTGACACGGTTAGTCACTCTAATACACTGACATGGTTAGTCACTCTTATACACTGACACGGTTAGTCACTCTAATACACTGAGGCTGTTAGTCACTCTAATACACTGACACGGTTATTCACTCTAATACACTGAGGCTGTTAGTTACTCTAATACACTGACACGGTTAGTCACTCTAATACACTGAAGCTGTTAGTCACTCTAATACACTGACACTGTTAGTCACTCTAATACACTGAGGCTGTTAGTCACTCTAATACAATGACGCTCTTAGTCACTCCAATACACTGACACGGTTAGTCATTCTAATACACTCTGGCTGTTAGTCACTCTAATACACTGAGGCTGTTAGTCACTCTAATACACTGAGGCTGTTAGTCACTCTAATACAATGACGCTCTTAGTCACTCCAATACACTGACACGGTTAGTCATTCTAATACACTCTGGCTGTTAGTCACTCTAATACACTGAGGCTGTTAGTCACTCTAATACACTGACATGGTTAGTCATTCTAATACACTGAGCCTGTTCGTCACTCTAATACACTGAAATGGTTAGTCACTCTAATACACTGACACTGTTAGTCACTCTAATACACTGACGCTGTTAGTCACTCTAATACACTGACGCTGTTAGTCACTCCAATACACTGACACGGTTAGTCATTCTAATACACTGAGGCTGTTAGTCACTCTAATACACTGACACGGTTAGTCACTCTAATACACTGACACCGTTAGTCATTCTAATACACTGAGGCTGTAAGTCACTCTAATACACTGAAACTGTTAGTCATTCTAATACACTGAGGCAGTTAGTCACTCTAATACACTGAGGCTGTTAGTCACTCTAAGATGACACTGTTAGTCACTCTAAGCTGTTAAATGTGATCAGCCAATATTGCAAAAAAGAGGTATGGACACCATACACCAGGTTTCCCCCCAGACTGTAGGTCTCCTGTAACCCAGTGGGTATTCTGACCTTTTCTGGGAAGTGGTAAATATATATGCATGGGATGTAAAGACCCCTTCGGTGTTAGTCGCTTTGGATGAAAGCACCTCTTAAAGGGTATGTGTACATC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106566327

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1605778 True 1914 lncRNA 0.42 3 70034724 70037391

Neighbor

gene id symbol gene type direction distance location
LOC110491172 LOC106566442 coding downstream 368707 69577674 ~ 69666017 (-)
LOC118939576 NA coding downstream 458881 69571853 ~ 69575843 (-)
LOC110491170 LOC106566448 coding downstream 528708 69470416 ~ 69506016 (-)
LOC110492644 LOC106566447 coding downstream 655543 69354502 ~ 69379181 (-)
LOC110492636 LOC106566437 coding downstream 911258 69113016 ~ 69123466 (-)
LOC118936543 LOC106566425 coding upstream 89862 70127253 ~ 70133280 (-)
LOC118939578 NA coding upstream 147984 70185375 ~ 70187858 (-)
LOC110492660 LOC106566428 coding upstream 179147 70216538 ~ 70221552 (-)
LOC110492649 LOC106566409 coding upstream 192448 70229839 ~ 70282239 (-)
tmed4 LOC106566412 coding upstream 385038 70422429 ~ 70426035 (-)
G1405912 NA non-coding downstream 8239 70024699 ~ 70026485 (-)
G1405907 NA non-coding downstream 18568 70014596 ~ 70016156 (-)
G1405555 NA non-coding downstream 56913 69976709 ~ 69977811 (-)
G1405550 NA non-coding downstream 63965 69970516 ~ 69970759 (-)
G1405541 NA non-coding downstream 76254 69957915 ~ 69958470 (-)
G1405954 NA non-coding upstream 67461 70104852 ~ 70106962 (-)
G1405918 NA non-coding upstream 75508 70112899 ~ 70113881 (-)
G1405933 NA non-coding upstream 88660 70126051 ~ 70126294 (-)
G1405919 NA non-coding upstream 97379 70134770 ~ 70135100 (-)
G1405958 NA non-coding upstream 99996 70137387 ~ 70137737 (-)
G1405172 NA other downstream 516611 69517755 ~ 69518113 (-)
G1405016 nsfl1c other downstream 754365 69277827 ~ 69280359 (-)
G1404974 LOC106566438 other downstream 827566 69203286 ~ 69207158 (-)
LOC118939478 LOC106566484 other downstream 1239699 68791189 ~ 68795025 (-)
G1403498 NA other downstream 2590545 67443421 ~ 67444179 (-)
G1405917 NA other upstream 41266 70078657 ~ 70095541 (-)
G1406228 NA other upstream 698256 70735647 ~ 70742179 (-)
G1406514 NA other upstream 1222931 71260322 ~ 71260817 (-)
G1406752 NA other upstream 1465088 71501118 ~ 71547366 (-)

Expression


Co-expression Network