G1405604


Basic Information

Item Value
gene id G1405604
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70126341 ~ 70128867 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1605336
TCGCATGTATCATGATCAATCAGTACATGTTCATAGTTTAGACAATGTATCAGCCTAGAGGATGATTTTCCAGGTATAGACTGGTTAGTGTCAACTTGAACACACCTGCACGTATTACCTCACAAGCATTGCTTGGCAGTGGCACTATTTGTAACAACCAAACAAACATTAACTTAACTTAACTTGGATTTTAATGAGCAATTGTGCAAGATTTAGTTTCCTCTCTCTGGGTTTTGGTAAGaaaaattgaaaaaataaaaaataaaaatgaggtgatgtgttgtgttgtttcgAGGTCCTGTTTTAACAAACAGAAAAAAATATAGCAtatgacaacaacaaaataaaaacGACTAAGGAAATATCCCAGTCAGGCGTCCCATGCTTTGAATGTCAAAGAGCAGGCTGGTGACTTGTCTGTTCTGGATCTTGTCCTTTTTAGATAGACCCTTTTGTCTTGAATCTAGGAAGCAGCTGAGTGAGGAAGAGtacaggagaggaaaggaaacacTTCAAATCGCTACTACTGAAATGTTCTAGTGCTCTACAGTTGCTGGGCAACCGTAGCTAAAAGCAGCCGTATGTTTTatttcttaaaaaaataaaaataattctaCTTGACTTATACTTGAAACTACGTGTTCACTAATAGATGCCTGTGGACTGGGCTCAGTACTCAAAACAGCCAAAAGTCAAGGGGGTTTTGAGACGAGTTGCAAACCAAGAGGATGATATTCATACCGTAAAGTTTAGTCCTTTAGTACTCTCCAGGCAGAATCTATCTTTTAACGTTGTCCATCCTACAAACATGACTCACGGGACACAAATAAGAGCACCTGTTATAGTTTTATAACTTTGGGCTTAAGTTTTCAAAAGGCAGGTGAATATGAAGGGAAAAAAAGGCATCTAAAATCGGATCGCTTCGTTTACTTAGGGTCAGGTTGGGTTTCATACTGAGAAAGTAGAGAATGAATTGAAACTGGAGAGTCTATCAATGTTATCTATGTTGACTGTTATTTCAGTATTATTCCACTAACAGCCTACTAAAACATTTGTCAAAATCCACAATCCAAGTTTCTGCTACTAACTCAAGTAGGTAAAGGTTAAGATCAAGGTAAAGTTCAAGATCAAGGCAAATATCAAGTTAAAGATCAAGATCAATAATGAATACAGAGGAGAAAAGCTAAAGGGCAAAGCTAATAATTCATCCTTTTTTTGAGCAATAAAATGTCagatacacacaaatgtaaaccTGCCAGACATTAAACATCATCACTTTGTACACCTTACTGAGATAAAAGCAATAATAATATTCATTTTTGATGAGATATTTTGTACACTGCAATAACATTCTCTTACACGTTTTCCTCAATGTCGTCGTTGTCATTTTTGTTTGCTATTCACATATGTCAGGGTGGTTATTACCATGCATCTCTAACAGAgagaaaatatatttgttttcttcaacaacaaaaaaaaaatacatatcagTAATGTGTGGCATATTGTTACCATGGAGACTTCTTAAAACAAATACTGGAAGGAAGACAGTTGAAGGAAGGAAAATCATCATGAGTCAAATACTGGTAATTTGACCTGTTTTCAAGAGCAGCTTTtacaagttgttttttttttccccATATAGGGTCATCATCACTGAGAGCTAGCCAAAGGGATTCTTAAAGGGGAAGAGTCTTCCCCATATAGGGTCATCATCACTGAGAGCTAGCCAAAGAGAATCTTAAAGGTGAAGAGCCTTCCCCATATAGGGTCATCATCACTGAGAGCTAGCCAAAGGGATTCTTAAAGGGGAAGAGCCTTCtgccaaaaaaaaataaaataaatgcttcTCTAGAAAAACCAGATAAAACCGGCATGACTTGGCATGTTTTCTACCGACTCAGATGTTTTCACATATCTTTGTCATTAAATATGTGGGCGCCACTGGTTGCTGTGTTTGGCAGCGTTGGTTATCATACTTTCTGGACAAATGATCTGCCTCTATGAGTCATAACATTAATCAGTTGTTCGAGTCTTTCTCTGAGATATTTTTAGTGTGGTTGTAGCCTATTGGATGAGGGCAATGTTGGCCTATTGGAGGAGGGCAATGTAGGCCTATTGGAGGAGGGCAATGTTGGCCTATTGGAGGAGGGCAATGTTGGCCTATTGGATGAGGGCAATGTTGGCCTATTGGATGAGGGCAATGTTGGCCTATTGGATGAGGGCAATGTTGGCCTATTGGAGGAGGGCAATGTTGGCCTATTGGATGAGGGCAATGTTGGCCTATTGGAGGAGGGCAATGTTGGCCTATTGGATGAGGGCAATGTTGGCGGGGCATTATCACTTCATTCCTTCATTAATCTTCCCCCTGACGGTGATGATGACAGACAGGGTGTGTTTTCCCCCTGACGGTGATGATGACAGACAGG

Function

NR:

description
PREDICTED: titin-like isoform X7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1605336 True 2429 lncRNA 0.39 3 70126341 70128867

Neighbor

gene id symbol gene type direction distance location
LOC110492652 LOC106566422 coding upstream 14504 70096449 ~ 70111837 (+)
LOC110492657 hck coding upstream 31074 70078693 ~ 70095267 (+)
LOC118939577 LOC106566421 coding upstream 57015 70043248 ~ 70069326 (+)
LOC110492659 LOC106566420 coding upstream 129943 69986177 ~ 69996398 (+)
LOC110492656 LOC106566444 coding upstream 429938 69693022 ~ 69696403 (+)
LOC110492666 NA coding downstream 62925 70191792 ~ 70194430 (+)
LOC110492650 LOC106566426 coding downstream 69571 70198438 ~ 70212716 (+)
LOC110492655 LOC106566410 coding downstream 251462 70380329 ~ 70394365 (+)
si:ch211-148l7.4 LOC106566411 coding downstream 265918 70394785 ~ 70402610 (+)
snrpg LOC106572841 coding downstream 274456 70403323 ~ 70411425 (+)
G1405603 NA non-coding upstream 658 70124170 ~ 70125683 (+)
G1405584 NA non-coding upstream 72714 70052589 ~ 70053627 (+)
G1405575 NA non-coding upstream 89138 70034464 ~ 70037203 (+)
G1405569 NA non-coding upstream 108335 70017481 ~ 70018006 (+)
G1405545 NA non-coding upstream 160574 69965546 ~ 69965767 (+)
G1405606 LOC106566425 non-coding downstream 3812 70132679 ~ 70133504 (+)
G1405607 NA non-coding downstream 5010 70133877 ~ 70134101 (+)
G1405613 NA non-coding downstream 13973 70142840 ~ 70143146 (+)
G1405645 NA non-coding downstream 58640 70187507 ~ 70188452 (+)
G1405310 LOC106566443 other upstream 453667 69671464 ~ 69672674 (+)
G1405218 NA other upstream 539435 69585989 ~ 69586906 (+)
G1405216 NA other upstream 542715 69580729 ~ 69583626 (+)
G1404827 NA other upstream 756965 69364521 ~ 69369376 (+)
fkbp1ab LOC100705189 other upstream 814078 69305670 ~ 69312263 (+)
G1405605 LOC106566425 other downstream 1054 70129921 ~ 70132301 (+)
G1405676 NA other downstream 127955 70256822 ~ 70257430 (+)
G1406381 NA other downstream 840748 70969615 ~ 70972604 (+)
G1406424 NA other downstream 1073575 71202442 ~ 71206092 (+)
G1406505 NA other downstream 1081405 71210272 ~ 71210764 (+)

Expression


Co-expression Network