G1405919



Basic Information


Item Value
gene id G1405919
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70134770 ~ 70135100 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1605777
tattatgttactttttatttcagtctacttggtaaatatttgaactcttcttgaactgcactgttggttaagtgcttgttggtaagcatttcacggtaaagtcgacacctgttggttaagggcttcttggtaagcatttcacagtaaggtctacctacacctgttggttaagggcttgttggtaagcatttcacggtaaagtctacacctgttggttaagggcttgttggtaagcatttcacggtaaagtcgacacctgttggttaagggcgtattggtaagcatttcacggtaaagtctacacctgttggttaagggcttgttgttaagc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1605777 True 331 lncRNA 0.41 1 70134770 70135100

Neighbor


gene id symbol gene type direction distance location
LOC118936543 LOC106566425 coding downstream 1490 70127253 ~ 70133280 (-)
LOC110491172 LOC106566442 coding downstream 468753 69577674 ~ 69666017 (-)
LOC118939576 NA coding downstream 558927 69571853 ~ 69575843 (-)
LOC110491170 LOC106566448 coding downstream 628754 69470416 ~ 69506016 (-)
LOC110492644 LOC106566447 coding downstream 755589 69354502 ~ 69379181 (-)
LOC118939578 NA coding upstream 50275 70185375 ~ 70187858 (-)
LOC110492660 LOC106566428 coding upstream 81438 70216538 ~ 70221552 (-)
LOC110492649 LOC106566409 coding upstream 94739 70229839 ~ 70282239 (-)
tmed4 LOC106566412 coding upstream 287329 70422429 ~ 70426035 (-)
LOC118939579 NA coding upstream 322821 70455694 ~ 70552795 (-)
G1405933 NA non-coding downstream 8476 70126051 ~ 70126294 (-)
G1405918 NA non-coding downstream 20889 70112899 ~ 70113881 (-)
G1405954 NA non-coding downstream 27808 70104852 ~ 70106962 (-)
G1405920 NA non-coding downstream 97379 70034724 ~ 70037391 (-)
G1405912 NA non-coding downstream 108285 70024699 ~ 70026485 (-)
G1405958 NA non-coding upstream 2287 70137387 ~ 70137737 (-)
G1405985 NA non-coding upstream 88062 70223162 ~ 70226004 (-)
G1406075 NA non-coding upstream 254508 70389608 ~ 70394300 (-)
G1406091 LOC106566414 non-coding upstream 317135 70452235 ~ 70453318 (-)
G1406097 NA non-coding upstream 318787 70453887 ~ 70456223 (-)
G1405917 NA other downstream 39229 70078657 ~ 70095541 (-)
G1405172 NA other downstream 616657 69517755 ~ 69518113 (-)
G1405016 nsfl1c other downstream 854411 69277827 ~ 69280359 (-)
G1404974 LOC106566438 other downstream 927612 69203286 ~ 69207158 (-)
LOC118939478 LOC106566484 other downstream 1339745 68791189 ~ 68795025 (-)
G1406228 NA other upstream 600547 70735647 ~ 70742179 (-)
G1406514 NA other upstream 1125222 71260322 ~ 71260817 (-)
G1406752 NA other upstream 1367379 71501118 ~ 71547366 (-)
G1406760 NA other upstream 1404858 71539958 ~ 71543469 (-)

Expression



Co-expression Network