G1405645



Basic Information


Item Value
gene id G1405645
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70187507 ~ 70188452 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1605395
GGTTTCCTTATCGCTCAGTCTCTTTCCATGCTAGCAatgtagtgtgttgtgtgttgagcACACAAGTATAGCTTTAAAAAAGTATTCAGTCTACATGCTGTCCTCTTTGGTCCTCTGGGGAGTGTTAATAAAGCAAGGACGGTGTGACATCACTGCTAGTCGACGGGGAGGAAAGGTCAAAGGTCAACCACCTCTTCCATATACGCAGGAGGACATAAGACTCTgttggagagagacaggagcttcATAGAGacaaggtagagagaggtggcttCATAGAgacaaggtagagagaggggactacATAGAgacaaggtagagagaggggactacATATAgacaaggtagagagagggggactaCATAGAgacaaggtagagagagggggactaCATAGAGacaaggtagagagaggtggactACATAGAgacaaggtagagagagggggactaCATAGAGacaaggtagagagaggtggctacatagagacaaagtagagagaggggactacATAGAgacaaggtagagagagggggctaCATAGAgacaaggtagagagaggggactacATAGAgacaaggtagagagaggggactacATAGAgacaaggtagagagaggggactacATAGAgacaaggtagagagagggggatacatAGAgacaaggtagagagagggggactaCATAGAGACAAGgtagagagagggggatacatAGAgacaaggtagagagagggggactaCATAGAgacaaggtagagagaggggga

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1605395 True 771 lncRNA 0.48 4 70187507 70188452

Neighbor


gene id symbol gene type direction distance location
LOC110492652 LOC106566422 coding upstream 75670 70096449 ~ 70111837 (+)
LOC110492657 hck coding upstream 92240 70078693 ~ 70095267 (+)
LOC118939577 LOC106566421 coding upstream 118181 70043248 ~ 70069326 (+)
LOC110492659 LOC106566420 coding upstream 191109 69986177 ~ 69996398 (+)
LOC110492656 LOC106566444 coding upstream 491104 69693022 ~ 69696403 (+)
LOC110492666 NA coding downstream 3340 70191792 ~ 70194430 (+)
LOC110492650 LOC106566426 coding downstream 9986 70198438 ~ 70212716 (+)
LOC110492655 LOC106566410 coding downstream 191877 70380329 ~ 70394365 (+)
si:ch211-148l7.4 LOC106566411 coding downstream 206333 70394785 ~ 70402610 (+)
snrpg LOC106572841 coding downstream 214871 70403323 ~ 70411425 (+)
G1405613 NA non-coding upstream 44361 70142840 ~ 70143146 (+)
G1405607 NA non-coding upstream 53406 70133877 ~ 70134101 (+)
G1405606 LOC106566425 non-coding upstream 54003 70132679 ~ 70133504 (+)
G1405604 NA non-coding upstream 58640 70126341 ~ 70128867 (+)
G1405603 NA non-coding upstream 61824 70124170 ~ 70125683 (+)
G1405663 NA non-coding downstream 33906 70222358 ~ 70222646 (+)
G1405630 NA non-coding downstream 34760 70223212 ~ 70231898 (+)
G1405676 NA non-coding downstream 68370 70256822 ~ 70257430 (+)
G1405605 LOC106566425 other upstream 55206 70129921 ~ 70132301 (+)
G1405310 LOC106566443 other upstream 514833 69671464 ~ 69672674 (+)
G1405218 NA other upstream 600601 69585989 ~ 69586906 (+)
G1405216 NA other upstream 603881 69580729 ~ 69583626 (+)
G1404827 NA other upstream 818131 69364521 ~ 69369376 (+)
G1406381 NA other downstream 781163 70969615 ~ 70972604 (+)
G1406424 NA other downstream 1013990 71202442 ~ 71206092 (+)
G1406505 NA other downstream 1021820 71210272 ~ 71210764 (+)
G1406507 NA other downstream 1025925 71214377 ~ 71216430 (+)

Expression



Co-expression Network