G1405676


Basic Information

Item Value
gene id G1405676
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70256822 ~ 70257430 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1605450
GCATCAGCTGCATCtgtgttctcctcctcttcctgatctgtgttctccccctcctctgtctccttctcctgcctttcctcctgctcctcctcggTTTCTTCTTCGTGCTGTGGCTGTTCCTGGGTCAGCTCTtctgtcttctcctccttctcgtcctcctctttggcctcctcctctgcctcttcgcTGCTCCCATCACTGTCCATGCTGAAGCCCTCGTCCATGACCAGCTTTAGAGGGTGGGACTTTCTTTTAGAGGACGGCTGGTCCTGCTCTGCCTCAGCGTCTGCCAGACGTCGCTTCCTGGCCAAGGGGCA
>TU1605451
GCATCAGCTGCATCtgtgttctcctcctcttcctgatctgtgttctccccctcctctgtctccttctcctgcctttcctcctgctcctcctcggTTTCTTCTTCGTGCTGTGGCTGTTCCTGGGTCAGCTCTtctgtcttctcctccttctcgtcctcctctttggcctcctcctctgcctcttcgcTGCTCCCATCACTGTCCATGCTGAAGCCCTCGTCCATGACCAGCTTTAGAGGGTGGGACTTTCTTTTAGAGGACGGCTGGTCCTGCTCTGCCTCAGCGTCTGCCAGACGTCGCTTCCTGGCCAAGGGGCAGCCCAGCACACTGCATGGGGAGAGAAGtgttgaggagagagggagaagggagtgttggggagagagagcgtgagagggagggagggagagaggggtgttggggagagagagggagggagggagagaggggtgatggggagagagagggagggagagagaggggtgttggggagagagagggagggagagaggggtgttggggagagagagggagggagggagagaggggtgttggggagagagagggagggagagagggtgtgagggagagggggagagaggggtattggtg

Function

NR:

description
PREDICTED: myelin transcription factor 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1605450 False 317 lncRNA 0.58 1 70256822 70257138
TU1605451 True 609 TUCP 0.60 1 70256822 70257430

Neighbor

gene id symbol gene type direction distance location
LOC110492650 LOC106566426 coding upstream 44106 70198438 ~ 70212716 (+)
LOC110492666 NA coding upstream 62392 70191792 ~ 70194430 (+)
LOC110492652 LOC106566422 coding upstream 144985 70096449 ~ 70111837 (+)
LOC110492657 hck coding upstream 161555 70078693 ~ 70095267 (+)
LOC118939577 LOC106566421 coding upstream 187496 70043248 ~ 70069326 (+)
LOC110492655 LOC106566410 coding downstream 123191 70380329 ~ 70394365 (+)
si:ch211-148l7.4 LOC106566411 coding downstream 137647 70394785 ~ 70402610 (+)
snrpg LOC106572841 coding downstream 146185 70403323 ~ 70411425 (+)
plpbp prosc coding downstream 154538 70411676 ~ 70422505 (+)
LOC110492662 NA coding downstream 168962 70426100 ~ 70427552 (+)
G1405630 NA non-coding upstream 24924 70223212 ~ 70231898 (+)
G1405663 NA non-coding upstream 34176 70222358 ~ 70222646 (+)
G1405645 NA non-coding upstream 68370 70187507 ~ 70188452 (+)
G1405678 NA non-coding downstream 1499 70258637 ~ 70259033 (+)
G1405681 NA non-coding downstream 8348 70265486 ~ 70330719 (+)
G1405699 NA non-coding downstream 66519 70323657 ~ 70324891 (+)
G1405701 NA non-coding downstream 67910 70325048 ~ 70325437 (+)
G1405702 NA non-coding downstream 68386 70325524 ~ 70326021 (+)
G1405605 LOC106566425 other upstream 124521 70129921 ~ 70132301 (+)
G1405310 LOC106566443 other upstream 584148 69671464 ~ 69672674 (+)
G1405218 NA other upstream 669916 69585989 ~ 69586906 (+)
G1405216 NA other upstream 673196 69580729 ~ 69583626 (+)
G1404827 NA other upstream 887446 69364521 ~ 69369376 (+)
G1406381 NA other downstream 712477 70969615 ~ 70972604 (+)
G1406424 NA other downstream 945304 71202442 ~ 71206092 (+)
G1406505 NA other downstream 953134 71210272 ~ 71210764 (+)
G1406507 NA other downstream 957239 71214377 ~ 71216430 (+)
G1406508 NA other downstream 988435 71245573 ~ 71246023 (+)

Expression


Co-expression Network