Gene
RNA
| Item | Value |
|---|---|
| gene id | G1406091 |
| gene name | LOC106566414 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 70452235 ~ 70453318 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| SRSF protein kinase 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1606033 | True | 579 | lncRNA | 0.55 | 4 | 70452235 | 70453318 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tmed4 | LOC106566412 | coding | downstream | 26200 | 70422429 ~ 70426035 (-) |
| LOC110492649 | LOC106566409 | coding | downstream | 169996 | 70229839 ~ 70282239 (-) |
| LOC110492660 | LOC106566428 | coding | downstream | 230683 | 70216538 ~ 70221552 (-) |
| LOC118939578 | NA | coding | downstream | 264377 | 70185375 ~ 70187858 (-) |
| LOC118936543 | LOC106566425 | coding | downstream | 318955 | 70127253 ~ 70133280 (-) |
| LOC118939579 | NA | coding | upstream | 4603 | 70455694 ~ 70552795 (-) |
| LOC110492786 | LOC105023799 | coding | upstream | 88232 | 70541550 ~ 70754162 (-) |
| trnat-agu-43 | NA | coding | upstream | 550033 | 71003351 ~ 71003424 (-) |
| trnah-gug-30 | NA | coding | upstream | 551053 | 71004371 ~ 71004442 (-) |
| trnat-agu-44 | NA | coding | upstream | 551409 | 71004727 ~ 71004800 (-) |
| G1406075 | NA | non-coding | downstream | 57935 | 70389608 ~ 70394300 (-) |
| G1405985 | NA | non-coding | downstream | 226231 | 70223162 ~ 70226004 (-) |
| G1405958 | NA | non-coding | downstream | 314498 | 70137387 ~ 70137737 (-) |
| G1405919 | NA | non-coding | downstream | 317135 | 70134770 ~ 70135100 (-) |
| G1405933 | NA | non-coding | downstream | 325941 | 70126051 ~ 70126294 (-) |
| G1406097 | NA | non-coding | upstream | 569 | 70453887 ~ 70456223 (-) |
| G1406099 | NA | non-coding | upstream | 8371 | 70461689 ~ 70462523 (-) |
| G1406100 | NA | non-coding | upstream | 10352 | 70463670 ~ 70466262 (-) |
| G1406172 | NA | non-coding | upstream | 176338 | 70629656 ~ 70630583 (-) |
| G1405917 | NA | other | downstream | 356694 | 70078657 ~ 70095541 (-) |
| G1405172 | NA | other | downstream | 934122 | 69517755 ~ 69518113 (-) |
| G1405016 | nsfl1c | other | downstream | 1171876 | 69277827 ~ 69280359 (-) |
| G1404974 | LOC106566438 | other | downstream | 1245077 | 69203286 ~ 69207158 (-) |
| G1406228 | NA | other | upstream | 282329 | 70735647 ~ 70742179 (-) |
| G1406514 | NA | other | upstream | 807004 | 71260322 ~ 71260817 (-) |
| G1406752 | NA | other | upstream | 1049161 | 71501118 ~ 71547366 (-) |
| G1406760 | NA | other | upstream | 1086640 | 71539958 ~ 71543469 (-) |
| G1407628 | NA | other | upstream | 1878488 | 72331806 ~ 72332715 (-) |
