XLOC_003305 (BX000700.11)



Basic Information


Item Value
gene id XLOC_003305
gene name BX000700.11
gene type misc
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 12502551 ~ 12502847 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00006481
gccgggttcagtggcgcgcgcctgtaatccaagctacagggaggctgaggctgcggatcgcttgagctcagggcttctggGCTGCAGTGGACTATGTTGATCGGGTGTCCGCGTTAAGTTCGGTATCGATATGGTTCTTCTGGGGGAGCTCGGGACCACCAGGTCGTTTAAGGAGGGGTGAACCGGCCCAGGTCGGAGACGGAGCAGGTCAAATCCCCCGTGCTGATCAGTAGTGGGATCGCGCCTGTGAATAGACACTGCAGTGCAGCCTGAgcgacacagagagacgcagacttT

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000111163

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00006481 True 297 misc_RNA 0.60 1 12502551 12502847

Neighbor


gene id symbol gene type direction distance location
XLOC_003304 NA coding upstream 8374 12493872 ~ 12494177 (+)
XLOC_003302 NA coding upstream 35491 12466766 ~ 12467060 (+)
XLOC_003284 si:ch211-156l18.7 coding upstream 318008 12175162 ~ 12184543 (+)
XLOC_003282 NA coding upstream 335761 12166486 ~ 12166790 (+)
XLOC_003280 si:ch211-156l18.8 coding upstream 410373 12052791 ~ 12092178 (+)
XLOC_003307 NA coding downstream 19923 12522770 ~ 12523029 (+)
XLOC_003319 NA coding downstream 215262 12718109 ~ 12718402 (+)
XLOC_003320 ap1s2 coding downstream 217097 12719944 ~ 12728353 (+)
XLOC_003321 rbb4l coding downstream 241728 12744575 ~ 12770546 (+)
XLOC_003322 NA coding downstream 279368 12782215 ~ 12785059 (+)
XLOC_003303 BX000700.1 misc upstream 26849 12475442 ~ 12475702 (+)
XLOC_003301 BX000700.13 misc upstream 61599 12440656 ~ 12440952 (+)
XLOC_003300 BX000700.15 misc upstream 70286 12431978 ~ 12432265 (+)
XLOC_003299 BX000700.2 misc upstream 96536 12405730 ~ 12406015 (+)
XLOC_003298 BX000700.3 misc upstream 113704 12388547 ~ 12388847 (+)
XLOC_003306 BX000700.25 misc downstream 14086 12516933 ~ 12517229 (+)
XLOC_003308 BX000700.26 misc downstream 33437 12536284 ~ 12536580 (+)
XLOC_003309 BX000700.4 misc downstream 39192 12542039 ~ 12542334 (+)
XLOC_003310 CABZ01022569.4 misc downstream 65140 12567987 ~ 12568283 (+)
XLOC_003311 CABZ01022569.5 misc downstream 75685 12578532 ~ 12578828 (+)
XLOC_003278 NA non-coding upstream 599041 11891240 ~ 11903510 (+)
XLOC_003276 NA non-coding upstream 626421 11839827 ~ 11876130 (+)
XLOC_003329 CR847923.1 non-coding downstream 649072 13151919 ~ 13152385 (+)
XLOC_003332 NA non-coding downstream 690876 13193723 ~ 13194597 (+)

Expression



Co-expression Network