Gene
RNA
| Item | Value |
|---|---|
| gene id | G1406172 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 70629656 ~ 70630583 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1606122 | True | 282 | lncRNA | 0.43 | 2 | 70629656 | 70630583 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939579 | NA | coding | downstream | 171097 | 70455694 ~ 70552795 (-) |
| tmed4 | LOC106566412 | coding | downstream | 203621 | 70422429 ~ 70426035 (-) |
| LOC110492649 | LOC106566409 | coding | downstream | 347417 | 70229839 ~ 70282239 (-) |
| LOC110492660 | LOC106566428 | coding | downstream | 408104 | 70216538 ~ 70221552 (-) |
| LOC118939578 | NA | coding | downstream | 441798 | 70185375 ~ 70187858 (-) |
| trnat-agu-43 | NA | coding | upstream | 372768 | 71003351 ~ 71003424 (-) |
| trnah-gug-30 | NA | coding | upstream | 373788 | 71004371 ~ 71004442 (-) |
| trnat-agu-44 | NA | coding | upstream | 374144 | 71004727 ~ 71004800 (-) |
| trnah-gug-31 | NA | coding | upstream | 375164 | 71005747 ~ 71005818 (-) |
| trnah-gug-32 | NA | coding | upstream | 376540 | 71007123 ~ 71007194 (-) |
| G1406100 | NA | non-coding | downstream | 163394 | 70463670 ~ 70466262 (-) |
| G1406099 | NA | non-coding | downstream | 167133 | 70461689 ~ 70462523 (-) |
| G1406097 | NA | non-coding | downstream | 173433 | 70453887 ~ 70456223 (-) |
| G1406091 | LOC106566414 | non-coding | downstream | 176338 | 70452235 ~ 70453318 (-) |
| G1406238 | NA | non-coding | upstream | 124174 | 70754757 ~ 70754978 (-) |
| G1406244 | NA | non-coding | upstream | 127078 | 70757661 ~ 70757947 (-) |
| G1406274 | NA | non-coding | upstream | 154173 | 70784756 ~ 70785451 (-) |
| G1406282 | NA | non-coding | upstream | 161217 | 70791800 ~ 70792201 (-) |
| G1406293 | NA | non-coding | upstream | 168417 | 70799000 ~ 70799216 (-) |
| G1405917 | NA | other | downstream | 534115 | 70078657 ~ 70095541 (-) |
| G1405172 | NA | other | downstream | 1111543 | 69517755 ~ 69518113 (-) |
| G1405016 | nsfl1c | other | downstream | 1349297 | 69277827 ~ 69280359 (-) |
| G1404974 | LOC106566438 | other | downstream | 1422498 | 69203286 ~ 69207158 (-) |
| G1406228 | NA | other | upstream | 105064 | 70735647 ~ 70742179 (-) |
| G1406514 | NA | other | upstream | 629739 | 71260322 ~ 71260817 (-) |
| G1406752 | NA | other | upstream | 871896 | 71501118 ~ 71547366 (-) |
| G1406760 | NA | other | upstream | 909375 | 71539958 ~ 71543469 (-) |
| G1407628 | NA | other | upstream | 1701223 | 72331806 ~ 72332715 (-) |
