G1405891


Basic Information

Item Value
gene id G1405891
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70753604 ~ 70754055 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1605708
TGTGATCTCCACCTTGGTTGCCGGGATTTTTCCCGCAATGGGATCGAAGTCACACACCGCAGCCATGCTATCCAGCTTGTCCATTACGTCTCCCTCCATGCGCGCGGGAGACCCGGGACAACTCCCCTGTTCACTCAGCCTGACCGGGTGCAAGTCTATCACTCTCGAGCGTTTCACCAATTCTCACGCGGTCCCTAAGCCAGGCGCGAGTCCGCAGCGACCTTTCCACTGAGAACAAGAGGGACCAACCTTCAGTGGATGAGCAGATGAGAACAGGAGATCCGAAGTTCAGCCAAATCTGTGAAGTGCTCTCCATTCGATATATACACCACTATACAGAAAGCTCGTATCTAATGGAAACGCAAAGTAACTGTTTGGTCAATTGATTTATAATGGTGCAGTTCAAACCAAGTCACAGtgtgctcttctctctctgtcttcaggcaGAGTAA

Function

NR:

description
PREDICTED: copine-5-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1605708 True 452 lncRNA 0.51 1 70753604 70754055

Neighbor

gene id symbol gene type direction distance location
LOC118939481 NA coding upstream 284637 70468208 ~ 70468967 (+)
LOC110492651 LOC106566414 coding upstream 289654 70445023 ~ 70463950 (+)
LOC118939580 NA coding upstream 294563 70457880 ~ 70459041 (+)
si:ch211-207e14.4 LOC106566413 coding upstream 309617 70432898 ~ 70443987 (+)
LOC110492662 NA coding upstream 326052 70426100 ~ 70427552 (+)
LOC118939465 NA coding downstream 17452 70771507 ~ 70772049 (+)
trnah-gug-7 NA coding downstream 59145 70813200 ~ 70813271 (+)
trnah-gug-8 NA coding downstream 61494 70815549 ~ 70815620 (+)
trnah-gug-9 NA coding downstream 63853 70817908 ~ 70817979 (+)
trnah-gug-10 NA coding downstream 66202 70820257 ~ 70820328 (+)
G1405856 NA non-coding upstream 64696 70688486 ~ 70688908 (+)
G1405830 NA non-coding upstream 126678 70626052 ~ 70626926 (+)
G1405823 NA non-coding upstream 142252 70610728 ~ 70611352 (+)
G1405817 NA non-coding upstream 146559 70600807 ~ 70607045 (+)
G1405805 NA non-coding upstream 182399 70567292 ~ 70571205 (+)
G1406281 NA non-coding downstream 37761 70791816 ~ 70792240 (+)
G1406315 NA non-coding downstream 63625 70817680 ~ 70817893 (+)
G1406350 NA non-coding downstream 138376 70892431 ~ 70892864 (+)
G1406354 NA non-coding downstream 141638 70895693 ~ 70896671 (+)
G1406357 NA non-coding downstream 144348 70898403 ~ 70899236 (+)
G1405676 NA other upstream 496174 70256822 ~ 70257430 (+)
G1405605 LOC106566425 other upstream 621303 70129921 ~ 70132301 (+)
G1405310 LOC106566443 other upstream 1080930 69671464 ~ 69672674 (+)
G1405218 NA other upstream 1166698 69585989 ~ 69586906 (+)
G1405216 NA other upstream 1169978 69580729 ~ 69583626 (+)
G1406381 NA other downstream 215560 70969615 ~ 70972604 (+)
G1406424 NA other downstream 448387 71202442 ~ 71206092 (+)
G1406505 NA other downstream 456217 71210272 ~ 71210764 (+)
G1406507 NA other downstream 460322 71214377 ~ 71216430 (+)
G1406508 NA other downstream 491518 71245573 ~ 71246023 (+)

Expression


Co-expression Network