G1406238



Basic Information


Item Value
gene id G1406238
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70754757 ~ 70754978 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1606195
atttgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagatgactggctacccctcatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaacgtgcttcaaaacctgcattgcttgctgtttggggttttaggctgggtttctgtacag

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1606195 True 222 lncRNA 0.46 1 70754757 70754978

Neighbor


gene id symbol gene type direction distance location
LOC110492786 LOC105023799 coding downstream 595 70541550 ~ 70754162 (-)
LOC118939579 NA coding downstream 296198 70455694 ~ 70552795 (-)
tmed4 LOC106566412 coding downstream 328722 70422429 ~ 70426035 (-)
LOC110492649 LOC106566409 coding downstream 472518 70229839 ~ 70282239 (-)
LOC110492660 LOC106566428 coding downstream 533205 70216538 ~ 70221552 (-)
trnat-agu-43 NA coding upstream 248373 71003351 ~ 71003424 (-)
trnah-gug-30 NA coding upstream 249393 71004371 ~ 71004442 (-)
trnat-agu-44 NA coding upstream 249749 71004727 ~ 71004800 (-)
trnah-gug-31 NA coding upstream 250769 71005747 ~ 71005818 (-)
trnah-gug-32 NA coding upstream 252145 71007123 ~ 71007194 (-)
G1406172 NA non-coding downstream 124174 70629656 ~ 70630583 (-)
G1406100 NA non-coding downstream 288495 70463670 ~ 70466262 (-)
G1406099 NA non-coding downstream 292234 70461689 ~ 70462523 (-)
G1406097 NA non-coding downstream 298534 70453887 ~ 70456223 (-)
G1406244 NA non-coding upstream 2683 70757661 ~ 70757947 (-)
G1406274 NA non-coding upstream 29778 70784756 ~ 70785451 (-)
G1406282 NA non-coding upstream 36822 70791800 ~ 70792201 (-)
G1406293 NA non-coding upstream 44022 70799000 ~ 70799216 (-)
G1406297 NA non-coding upstream 46805 70801783 ~ 70801987 (-)
G1406228 NA other downstream 12578 70735647 ~ 70742179 (-)
G1405917 NA other downstream 659216 70078657 ~ 70095541 (-)
G1405172 NA other downstream 1236644 69517755 ~ 69518113 (-)
G1405016 nsfl1c other downstream 1474398 69277827 ~ 69280359 (-)
G1406514 NA other upstream 505344 71260322 ~ 71260817 (-)
G1406752 NA other upstream 747501 71501118 ~ 71547366 (-)
G1406760 NA other upstream 784980 71539958 ~ 71543469 (-)
G1407628 NA other upstream 1576828 72331806 ~ 72332715 (-)
G1407755 NA other upstream 1680451 72435429 ~ 72437847 (-)

Expression



Co-expression Network