XLOC_033052


Basic Information

Item Value
gene id XLOC_033052
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40477430 ~ 40482198 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065208
GTGAAGAGTACAAATATCAGGTTGTATCGGACCCTGAAAGAACACAAGTCTGAGAAGATGAAGATGAATTTGAGGGATGATCAGACTCTTCGCTGTTTGAGGGAATAGCAGCTTTATTGCCTGCAacagatttgtttatttgttcctCCATCAGCTCTTTTTCCATCTGCATTTCATCATACTCTTCCTCGACTGAGGATAAATCAGAGCTGTTCAATCCCTCCTCAATGGTAAGCATCATAATATCTCCATTAATGTTGTCCTTTGTCTCTGTTAATTGAAGAGGCTCCGTTTGTTCAAAGAGGTCACACTCGGAAAGTCCATCTTTGTCTGCTAATGCCTCCCCTGCATCACAAATATCTGGGAACATCACATCAATGTCCTCTTCACTTGAAAACATCCTGTCTGCTACTATACCACTAGGgtaaaatgattcaattaaagttttaccagTGCACATTTTGTCAAAAAGTAATCGATCTGCGTGTGCTAAGCTTTCATAAACTGCATTAGAAGCCAGCTGAACGTTACGAGaacttttatttttaccatttttagtCAGCCCCCATGCTGCCTTCCCCATGTCCTTTACTTGTAGCTCCTCTGCTACTATGTTATAATCTACTTCTTTCTTACTATATAAATCAGAATGAAGGTCAACTGACACTTCATCATCCTCCGACTCCAATGGCTTGTCTTTTTCTAAACCCTCCGCTAAATCTAAATCAACTCCATGTGCTAGCTCATCCCCGCATCCTAACTCATCTCCCTGTTCCAGAATTATTTCCACTTCTGTCTCATCAACTTGTAGTCTTCTTTCTGGATATACTATTTTATTTGTCCTCCTCTCTTGTGACCCCTTATGCTCCACTACAATTTTTCTGTGCACTTTCGGTGTTTGCTCTCTTGAGTTTGGAGAACTTAGACTTTTGCTATTGTGAAGCATGttgaagtacatttttttttgcactgagATGTTTGAATGCTGCTTATGTTTTGGGTTTTTGATGATCCCGACAATCTTCAGGGACAGGTGACTAAGCCTGGAAGTGTCCTCTGAGGCTCGGCGGATGCTCCTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065208 True 1079 lncRNA 0.41 2 40477430 40482198

Neighbor

gene id symbol gene type direction distance location
XLOC_033051 crbn coding downstream 10569 40456798 ~ 40466861 (-)
XLOC_033050 vhl coding downstream 22321 40451270 ~ 40455109 (-)
XLOC_033049 tatdn2 coding downstream 28031 40439858 ~ 40449399 (-)
XLOC_033048 ccdc174 coding downstream 42405 40429773 ~ 40435025 (-)
XLOC_033047 si:dkey-28n18.9 coding downstream 48016 40422224 ~ 40429414 (-)
XLOC_033053 tomm6 coding upstream 90347 40572545 ~ 40573270 (-)
XLOC_033054 tspo coding upstream 96021 40578219 ~ 40583253 (-)
XLOC_033055 CU855953.1 coding upstream 143106 40625304 ~ 40625420 (-)
XLOC_033056 NA coding upstream 143433 40625631 ~ 40629161 (-)
XLOC_033057 ppil1 coding upstream 165590 40647788 ~ 40659100 (-)
XLOC_033046 NA non-coding downstream 68305 40383424 ~ 40409125 (-)
XLOC_033043 NA non-coding downstream 294910 40173228 ~ 40182520 (-)
XLOC_033038 NA non-coding downstream 433319 40038692 ~ 40044111 (-)
XLOC_033025 CU467856.1 non-coding downstream 951925 39524924 ~ 39525505 (-)
XLOC_033024 NA non-coding downstream 955598 39491846 ~ 39521832 (-)
XLOC_033058 dre-mir-429b non-coding upstream 170931 40653129 ~ 40653238 (-)
XLOC_033059 dre-mir-141 non-coding upstream 173805 40656003 ~ 40656085 (-)
XLOC_033060 dre-mir-200c non-coding upstream 174006 40656204 ~ 40656288 (-)

Expression


Co-expression Network