G1406362


Basic Information

Item Value
gene id G1406362
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70901026 ~ 70901459 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1606322
aagaaactcaataactcttccatttgacaaagtccccatctcatggtaggttaattacttacattaactgattcatctgctttttcttaggtttttaccatttttaatctcgagatccaactgagaaatgtagtttccccgaaacgaccaaaatgatgaagaaatcgtgtatgattctgaatgtttactcatatctcgcgatattcccactttgggtcccaaaccatagtttaagaatccatgtcagagtatcttgagtttattcagttcgagacccaaatgaaaaatttactgtcctcggatgaccgaaattaagaagaaatagcttgtgactcaaaatgtttactgatatcgcgctgcccacctctcacatactcaggcccactttgggtcccaaaacatagcttaagaaaccctgttgctagacaattgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1606322 True 434 lncRNA 0.38 1 70901026 70901459

Neighbor

gene id symbol gene type direction distance location
si:ch211-71n6.4 pnba coding upstream 9210 70867461 ~ 70891816 (+)
trnah-gug-29 NA coding upstream 33527 70867428 ~ 70867499 (+)
trnah-gug-28 NA coding upstream 33836 70867119 ~ 70867190 (+)
trnah-gug-27 NA coding upstream 35308 70865647 ~ 70865718 (+)
trnah-gug-26 NA coding upstream 43837 70857118 ~ 70857189 (+)
trnat-agu-6 NA coding downstream 8629 70910088 ~ 70910161 (+)
trnat-agu-7 NA coding downstream 11815 70913274 ~ 70913347 (+)
trnat-agu-8 NA coding downstream 12877 70914336 ~ 70914409 (+)
trnat-agu-9 NA coding downstream 13939 70915398 ~ 70915471 (+)
trnat-agu-10 NA coding downstream 17125 70918584 ~ 70918657 (+)
G1406357 NA non-coding upstream 1790 70898403 ~ 70899236 (+)
G1406354 NA non-coding upstream 4355 70895693 ~ 70896671 (+)
G1406350 NA non-coding upstream 8162 70892431 ~ 70892864 (+)
G1406315 NA non-coding upstream 83133 70817680 ~ 70817893 (+)
G1406281 NA non-coding upstream 108786 70791816 ~ 70792240 (+)
G1406366 NA non-coding downstream 3832 70905291 ~ 70905726 (+)
trnat-cgu-7 NA non-coding downstream 5878 70907337 ~ 70935898 (+)
trnat-agu-21 NA non-coding downstream 36650 70938109 ~ 70938372 (+)
G1406411 NA non-coding downstream 190446 71091905 ~ 71092173 (+)
G1406447 NA non-coding downstream 250990 71152449 ~ 71153222 (+)
G1405676 NA other upstream 643596 70256822 ~ 70257430 (+)
G1405605 LOC106566425 other upstream 768725 70129921 ~ 70132301 (+)
G1405310 LOC106566443 other upstream 1228352 69671464 ~ 69672674 (+)
G1405218 NA other upstream 1314120 69585989 ~ 69586906 (+)
G1405216 NA other upstream 1317400 69580729 ~ 69583626 (+)
G1406381 NA other downstream 68156 70969615 ~ 70972604 (+)
G1406424 NA other downstream 300983 71202442 ~ 71206092 (+)
G1406505 NA other downstream 308813 71210272 ~ 71210764 (+)
G1406507 NA other downstream 312918 71214377 ~ 71216430 (+)
G1406508 NA other downstream 344114 71245573 ~ 71246023 (+)

Expression


Co-expression Network