G1406407



Basic Information


Item Value
gene id G1406407
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71073107 ~ 71076732 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1606377
gcccattgaaacatattccaaatgcacagtgactttgaaaaagtaaggaaacaaaaaaaaatacatctaaaattttttgagcatgacaaattcgtgatggtacctgcccattgaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaattcgataaacaaattcgtgatggtacctgcccattgaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaattcgataaacaaattcatgatggtacctgcccattaaaacatattccaaatgcacagtgactttgaaaaagtaagaaaccaaaaaaaatacatctaaaaaattttgagcatgacaaattcgtgatggtacctgcccattgaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaattcgataaacaaattcgtgatggtacctgcccattaaaacatattccaaatgcacagtgactttgaaaaagtaaggaaacaaaaaaaaaatacatctaaaaaattttgagcatgacaaattcgtgatggtacctgcccattaaaacatattccaaatgcacagtgactttgaaaaagtaaggaaacaaaaaaaaatacatctaaaaaattttgagcatgacaaattcgtgatggtacctgcccattgaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaattcgataaacaaattcgtgatggtacctgcccattaaaacatattccaaatgcacagtgactttgaaaaagtaagaaacaaaaaaaaatacatctaaaaaattttgagcatgacaaattcgtgatggtacctgcccattgaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaattcgataaacaaattcgtgatggtacctgcccattaaaacatattgcaaatgcacagagactttgaaaaagtaaggaaacataaacaaaaaaacatcccaaaaaatgttgggtaaccagctgcatattttagatcacaagcttgaattttgagcatgacaaattcgtgatggtacctgcccattaaaacatattgcaaatgcacagtgactttgaaaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1606377 True 1159 lncRNA 0.32 4 71073107 71076732

Neighbor


gene id symbol gene type direction distance location
trnah-gug-49 NA coding downstream 27506 71045530 ~ 71045601 (-)
trnat-agu-70 NA coding downstream 28523 71044511 ~ 71044584 (-)
trnat-agu-69 NA coding downstream 29899 71043135 ~ 71043208 (-)
trnat-agu-68 NA coding downstream 31275 71041759 ~ 71041832 (-)
trnat-agu-67 NA coding downstream 32636 71040398 ~ 71040471 (-)
LOC110492672 LOC106566404 coding upstream 665244 71741976 ~ 71764421 (-)
LOC118939604 NA coding upstream 729538 71806270 ~ 71806324 (-)
LOC118939585 NA coding upstream 766415 71843147 ~ 71850380 (-)
LOC110492674 rbm15 coding upstream 776125 71852857 ~ 71858795 (-)
alx3 LOC106566393 coding upstream 789618 71866350 ~ 71881855 (-)
G1406388 NA non-coding downstream 83577 70962973 ~ 70989530 (-)
G1406367 NA non-coding downstream 166891 70905290 ~ 70906216 (-)
G1406365 NA non-coding downstream 169034 70903817 ~ 70904073 (-)
G1406364 NA non-coding downstream 171202 70901634 ~ 70901905 (-)
G1406361 NA non-coding downstream 172103 70900631 ~ 70901004 (-)
G1406416 NA non-coding upstream 18247 71094979 ~ 71095352 (-)
G1406419 NA non-coding upstream 21267 71097999 ~ 71098250 (-)
G1406421 NA non-coding upstream 22513 71099245 ~ 71099572 (-)
G1406482 NA non-coding upstream 80598 71157330 ~ 71157705 (-)
G1406493 NA non-coding upstream 117130 71193862 ~ 71195096 (-)
G1406228 NA other downstream 330928 70735647 ~ 70742179 (-)
LOC110492660 LOC106566428 other downstream 851851 70216538 ~ 70221552 (-)
G1405917 NA other downstream 977566 70078657 ~ 70095541 (-)
G1405172 NA other downstream 1554994 69517755 ~ 69518113 (-)
G1405016 nsfl1c other downstream 1792748 69277827 ~ 69280359 (-)
G1406514 NA other upstream 183590 71260322 ~ 71260817 (-)
G1406752 NA other upstream 425747 71501118 ~ 71547366 (-)
G1406760 NA other upstream 463226 71539958 ~ 71543469 (-)
G1407628 NA other upstream 1255074 72331806 ~ 72332715 (-)
G1407755 NA other upstream 1358697 72435429 ~ 72437847 (-)

Expression



Co-expression Network