G1406411


Basic Information

Item Value
gene id G1406411
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71091905 ~ 71092173 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1606386
ctttgctatgaagcccctaaataagatctggtgcaaccgattaccttcagaagtcacataattagttaaataaagtccacctgtgtgcaatctaagtgtcacatgatctgtcacatgatctcagtgtacacctgttctgaaaggccccagtctGCAACACCATTAAGTAAGGGGCACCACCCCAAAAAATATCAgagactttgaacatcccacggagcaccattaaatccattatttaaaaaaatggaaagaataggtcaccacaacaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1606386 True 269 lncRNA 0.41 1 71091905 71092173

Neighbor

gene id symbol gene type direction distance location
trnan-auu-2 NA coding upstream 94118 70997717 ~ 70997787 (+)
trnan-auu NA coding upstream 98442 70993393 ~ 70993463 (+)
trnat-agu-42 NA coding upstream 99518 70992314 ~ 70992387 (+)
trnat-agu-41 NA coding upstream 100580 70991252 ~ 70991325 (+)
trnat-agu-40 NA coding upstream 101642 70990190 ~ 70990263 (+)
LOC118939582 LOC106566316 coding downstream 11008 71103181 ~ 71193739 (+)
LOC118939583 NA coding downstream 105094 71196255 ~ 71198225 (+)
LOC110491184 LOC106572946 coding downstream 194373 71286546 ~ 71362472 (+)
LOC110491185 LOC106566323 coding downstream 289182 71381355 ~ 71412264 (+)
LOC110517572 LOC106572960 coding downstream 326603 71418776 ~ 71500706 (+)
trnat-agu-21 NA non-coding upstream 153533 70938109 ~ 70938372 (+)
trnat-cgu-7 NA non-coding upstream 156007 70907337 ~ 70935898 (+)
G1406366 NA non-coding upstream 186179 70905291 ~ 70905726 (+)
G1406362 NA non-coding upstream 190446 70901026 ~ 70901459 (+)
G1406357 NA non-coding upstream 192669 70898403 ~ 70899236 (+)
G1406447 NA non-coding downstream 60276 71152449 ~ 71153222 (+)
G1406453 NA non-coding downstream 77507 71169680 ~ 71170260 (+)
G1406459 NA non-coding downstream 92369 71184542 ~ 71185729 (+)
G1406381 NA other upstream 119301 70969615 ~ 70972604 (+)
G1405676 NA other upstream 834475 70256822 ~ 70257430 (+)
G1405605 LOC106566425 other upstream 959604 70129921 ~ 70132301 (+)
G1405310 LOC106566443 other upstream 1419231 69671464 ~ 69672674 (+)
G1405218 NA other upstream 1504999 69585989 ~ 69586906 (+)
G1406424 NA other downstream 110269 71202442 ~ 71206092 (+)
G1406505 NA other downstream 118099 71210272 ~ 71210764 (+)
G1406507 NA other downstream 122204 71214377 ~ 71216430 (+)
G1406508 NA other downstream 153400 71245573 ~ 71246023 (+)
G1406509 NA other downstream 158901 71251074 ~ 71251644 (+)

Expression


Co-expression Network