G1406424


Basic Information

Item Value
gene id G1406424
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71202442 ~ 71206092 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1606401
ggcggcaggtagcctagtggttagagtgtagaggaggcaggtagtctaatggttagagtgtagggacggtaggtagcctagtggttagagtgtagggacggtaggtagcctagtggttagagtgtagggaccgCTGGTAAcctactggttagagtgtagggacggcaggtagcctagtggttagagtttagggacggcaggtagcctagtggttagagtgtttggaCGGCAGGTAACTTAGTGGTTATAGTGTAgggacggtaggtagcctagtggttagagtgtagggacggtaggtagcctagtggttagagtgtagggacggtaggtagccaggtggttagagtgtagggacggtaggtagccaggtggttagagtgtaaggacggtaggtagcctagtggttagagcgtagggacggctggtaacctagtggttagagtgtagaggtggcaggtagcctagtggttagagtgtaaggacggtaggtagcctattggttagagtgtagggacggtatgtagcctagtggttagagtgtagggacggcaggtagtctagtggttagagtgtagaggcggcaggtagcctagtggttagagtgtagaggaggcaggtagtctagtggttagaggggggtggcaggtagcctagtggttagagtgtagaggcggcaggtagcctagtggttagagtgtagaggaggcaggtagtctagtggttagaggggggtggcaggtagcctagtggttagagtgtagaggaggcaggtagtctagtggttagaggggggtggcaggtagcctagtggttagagtgtagaggcggcagggtagcctagtggttagagtgtaggggcggcaggtagtctagtggttagagtgtaggggcggcaggtagcctagtggttagagtgtaggggcggcaggtagcctagtggttagagtgtagaggtggcaggtagcctagtggttagagtgtagaggtggctggtagcctagtggttagagtgtagaggtggctggtagcctagtggttagagtgtaggggcggcaggtagcctagtggttagagtgtaggggcggcaggtagcctagtggttagagtgtagaggtggcaggtagcctagtggttagagtgtagaggtggcaggtagcctagtggttagagtgtagaggtggctggtagcctagtggttagagtgtagaggtggctggtagcctagtggttagagtgtagaggtggctggtagcctagtggttagagtgtagaggtggctggtagcctagtggttagagtgtagaggaggcaggtagcctagtggttagagtgtagaggtggctggtagcctagtggttagagtgtagaggaggcaggtagcctagtggttagagtgtagaggtggctgGTAGCCCAGTGGGTAGAGAGTTGGACtcgtaactggaaggttgcatgatcaaatccctgagctgacaaggtaaaaatctgtctttctgcccctgaacaaggcagttaacccaccgtttcgtggtaggccgtcattgtaaataagaatttgttctcaactgacttgcctcgtaAAATAAATGTTCAATTAAAAAGCATGTTCATTCGTTATACAATAGTTAGAACTGGTTTCTATCTTTTCAACAACTGTCTTGTTTCTTTACACACATTTTTTTATGGCGGACTGTGCTAGGAGCAGGAGGTATAGCACGCCCTGTCTTTTCAAACGTCCAGAGGATGTTTTGTGTCGAAGCTGTCGTTTGTTGTCCAACATCAAAtgttcctgTCAGGCCAGGtgttcaacatcaactgttcctgTCAGGCCAGGTGTTCAACATCAAACTGATCCTGTCAGGCCAGGtgttcaacatcaactgttcctgTCTGACTACCCCCTTGGGAATCTGACTACCCCCGTATTATCTGTGTGGGAATCTGACTACCCCGTGGGAATCTGACTACCCCCGTGGGAATCTGACTACCCCCGTATTGTCCGTGTGGGAATCTTATGTGAAGCTCCAACCTGTAACATTAAAAAGAGGCTTTGTTACAACATGACAATTCAAGATGAAATGGCAATTCTTCTGATGCAGTTGGTGTTTTCATTCCCCAGGCTACtattatgtctgtctctctgcatgcAGTACAATCCACCCAACCTGGAGAAGAACCAGCCTACTGGGGTCTTCTCGTTGTCTCTCTTGAAACGCCTTTTTCCCAAAGCCACTTGCAGTCATGCATGCACACATTTACGTAGGgctggtcccgggaatcaaacccactaccctggtgttacacatgccatgctctaccaactgagctacaaagttcactgcactctcgctctctccatcatcatcatcaccacctctctcgctctctccaccaccacctctttctttctgtctctcccagtctgatgCTGTTAGTTCTTCTTCTGAACTTTATTCTTTATTTATTCTAAACTTTAttcttatgtaaaaaaaatattgaaatggaTGATACATAttataaaaaaagaaaagaaatgcTATACAAGTATTTAATAAACAGAAACGATGAGAATGTAACTGATGATGATGAAGACTATGATTGATATCGCTAATGATgaagatgacgatgatgatgattgtgataatgatgaagatgatgAtgattgtgatgatgatgatgatgataatgatggtgatgaacatgatgatgatgatattgatGGTAATAATGAAGATTAAAACTCCTA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1606401 True 2746 TUCP 0.48 4 71202442 71206092

Neighbor

gene id symbol gene type direction distance location
LOC118939583 NA coding upstream 4409 71196255 ~ 71198225 (+)
LOC118939582 LOC106566316 coding upstream 9394 71103181 ~ 71193739 (+)
trnan-auu-2 NA coding upstream 204655 70997717 ~ 70997787 (+)
trnan-auu NA coding upstream 208979 70993393 ~ 70993463 (+)
trnat-agu-42 NA coding upstream 210055 70992314 ~ 70992387 (+)
LOC110491184 LOC106572946 coding downstream 80454 71286546 ~ 71362472 (+)
LOC110491185 LOC106566323 coding downstream 175263 71381355 ~ 71412264 (+)
LOC110517572 LOC106572960 coding downstream 212684 71418776 ~ 71500706 (+)
trnat-agu-71 NA coding downstream 343414 71549506 ~ 71549579 (+)
trnat-agu-72 NA coding downstream 344504 71550596 ~ 71550669 (+)
G1406426 NA non-coding upstream 86 71201519 ~ 71202356 (+)
G1406459 NA non-coding upstream 16713 71184542 ~ 71185729 (+)
G1406453 NA non-coding upstream 32182 71169680 ~ 71170260 (+)
G1406501 NA non-coding downstream 348 71206440 ~ 71206664 (+)
G1406502 NA non-coding downstream 3163 71209255 ~ 71209480 (+)
G1406517 NA non-coding downstream 56429 71262521 ~ 71262739 (+)
G1406521 NA non-coding downstream 58942 71265034 ~ 71265236 (+)
G1406522 NA non-coding downstream 59205 71265297 ~ 71265514 (+)
G1406381 NA other upstream 229838 70969615 ~ 70972604 (+)
G1405676 NA other upstream 945012 70256822 ~ 70257430 (+)
G1405605 LOC106566425 other upstream 1070141 70129921 ~ 70132301 (+)
G1405310 LOC106566443 other upstream 1529768 69671464 ~ 69672674 (+)
G1405218 NA other upstream 1615536 69585989 ~ 69586906 (+)
G1406505 NA other downstream 4180 71210272 ~ 71210764 (+)
G1406507 NA other downstream 8285 71214377 ~ 71216430 (+)
G1406508 NA other downstream 39481 71245573 ~ 71246023 (+)
G1406509 NA other downstream 44982 71251074 ~ 71251644 (+)
G1406510 NA other downstream 49887 71255979 ~ 71256977 (+)

Expression


Co-expression Network