G1406502


Basic Information

Item Value
gene id G1406502
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71209255 ~ 71209480 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1606502
gccatggctccatccattacgaggccattgctccatccatcacgaggccatggctccatccatcacgaggccattgctccatccatcacgaggccattgctccatccatcacgaggccattgctccatccatcacgaggcgatggctcaaTCCATCATGAGGCCATTGCTCTATCCATCACGAGgagatggctccatccatcacgggCGATGgatccatccatcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1606502 True 226 lncRNA 0.56 1 71209255 71209480

Neighbor

gene id symbol gene type direction distance location
LOC118939583 NA coding upstream 11222 71196255 ~ 71198225 (+)
LOC118939582 LOC106566316 coding upstream 16207 71103181 ~ 71193739 (+)
trnan-auu-2 NA coding upstream 211468 70997717 ~ 70997787 (+)
trnan-auu NA coding upstream 215792 70993393 ~ 70993463 (+)
trnat-agu-42 NA coding upstream 216868 70992314 ~ 70992387 (+)
LOC110491184 LOC106572946 coding downstream 77066 71286546 ~ 71362472 (+)
LOC110491185 LOC106566323 coding downstream 171875 71381355 ~ 71412264 (+)
LOC110517572 LOC106572960 coding downstream 209296 71418776 ~ 71500706 (+)
trnat-agu-71 NA coding downstream 340026 71549506 ~ 71549579 (+)
trnat-agu-72 NA coding downstream 341116 71550596 ~ 71550669 (+)
G1406501 NA non-coding upstream 2591 71206440 ~ 71206664 (+)
G1406426 NA non-coding upstream 6899 71201519 ~ 71202356 (+)
G1406459 NA non-coding upstream 23526 71184542 ~ 71185729 (+)
G1406517 NA non-coding downstream 53041 71262521 ~ 71262739 (+)
G1406521 NA non-coding downstream 55554 71265034 ~ 71265236 (+)
G1406522 NA non-coding downstream 55817 71265297 ~ 71265514 (+)
G1406523 NA non-coding downstream 57969 71267449 ~ 71267652 (+)
G1406526 NA non-coding downstream 62099 71271579 ~ 71271779 (+)
G1406424 NA other upstream 3163 71202442 ~ 71206092 (+)
G1406381 NA other upstream 236651 70969615 ~ 70972604 (+)
G1405676 NA other upstream 951825 70256822 ~ 70257430 (+)
G1405605 LOC106566425 other upstream 1076954 70129921 ~ 70132301 (+)
G1405310 LOC106566443 other upstream 1536581 69671464 ~ 69672674 (+)
G1406505 NA other downstream 792 71210272 ~ 71210764 (+)
G1406507 NA other downstream 4897 71214377 ~ 71216430 (+)
G1406508 NA other downstream 36093 71245573 ~ 71246023 (+)
G1406509 NA other downstream 41594 71251074 ~ 71251644 (+)
G1406510 NA other downstream 46499 71255979 ~ 71256977 (+)

Expression


Co-expression Network