G1406506



Basic Information


Item Value
gene id G1406506
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71210249 ~ 71210761 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1606506
tgatggatggagccatggcctcgtgatggatggagccacggcctcgtgatggatggagccatggcctcgtgatggatggagccacggcctcgtgatggatggagccacggcctcgtgctggatggagccacggcctcgtgatggatggagccacggcctcgtgatggatggagccacggcctcgtgatggatggagccatggcctcgtgatggatggagccatggcttCGTGATGGAGCCATGGCTCCTTgccatggagccatggcctcgtgatggatggagccatcgcctcgtgatggatggagccatggcctcgtaatggatggagccatcgcctcgtgatggatggagccatggcctcgtgatggatggagccaaggcctcgtgatggatggagccatggcctcgtgatggatggagccacggcctcgtgatggatggagccacggcctcgtgatggatggagccaaggcctcgtgatggatggagcaatggcctcgtgatggatggagc

Function


NR:

description
hypothetical protein EH28_24508, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1606506 True 513 lncRNA 0.62 1 71210249 71210761

Neighbor


gene id symbol gene type direction distance location
trnah-gug-49 NA coding downstream 164648 71045530 ~ 71045601 (-)
trnat-agu-70 NA coding downstream 165665 71044511 ~ 71044584 (-)
trnat-agu-69 NA coding downstream 167041 71043135 ~ 71043208 (-)
trnat-agu-68 NA coding downstream 168417 71041759 ~ 71041832 (-)
trnat-agu-67 NA coding downstream 169778 71040398 ~ 71040471 (-)
LOC110492672 LOC106566404 coding upstream 531215 71741976 ~ 71764421 (-)
LOC118939604 NA coding upstream 595509 71806270 ~ 71806324 (-)
LOC118939585 NA coding upstream 632386 71843147 ~ 71850380 (-)
LOC110492674 rbm15 coding upstream 642096 71852857 ~ 71858795 (-)
alx3 LOC106566393 coding upstream 655589 71866350 ~ 71881855 (-)
G1406504 NA non-coding downstream 355 71209559 ~ 71209894 (-)
G1406500 NA non-coding downstream 7911 71199077 ~ 71202338 (-)
G1406493 NA non-coding downstream 15153 71193862 ~ 71195096 (-)
G1406482 NA non-coding downstream 52544 71157330 ~ 71157705 (-)
G1406421 NA non-coding downstream 110677 71099245 ~ 71099572 (-)
G1406511 NA non-coding upstream 45203 71255964 ~ 71256183 (-)
G1406519 NA non-coding upstream 52765 71263526 ~ 71263750 (-)
G1406527 NA non-coding upstream 61564 71272325 ~ 71272537 (-)
G1406602 NA non-coding upstream 86992 71297753 ~ 71298363 (-)
G1406606 NA non-coding upstream 91788 71302549 ~ 71303632 (-)
G1406228 NA other downstream 468070 70735647 ~ 70742179 (-)
LOC110492660 LOC106566428 other downstream 988993 70216538 ~ 70221552 (-)
G1405917 NA other downstream 1114708 70078657 ~ 70095541 (-)
G1405172 NA other downstream 1692136 69517755 ~ 69518113 (-)
G1405016 nsfl1c other downstream 1929890 69277827 ~ 69280359 (-)
G1406514 NA other upstream 49561 71260322 ~ 71260817 (-)
G1406752 NA other upstream 291718 71501118 ~ 71547366 (-)
G1406760 NA other upstream 329197 71539958 ~ 71543469 (-)
G1407628 NA other upstream 1121045 72331806 ~ 72332715 (-)
G1407755 NA other upstream 1224668 72435429 ~ 72437847 (-)

Expression



Co-expression Network