G1406517


Basic Information

Item Value
gene id G1406517
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71262521 ~ 71262739 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1606517
gaacaggacagggtagctactgttgaagtgtaggacagaacaggacagggtaCAGAGTAGCTgctgttgaagtgtaggacagaacaggacagggtagctactgttgaagtgtaggacagaacaggacagggtaCAGAGTAGCTgctgttgaagtgtaggacagaacaggacagggtagctactgttgaagtgtaggacagaacaggacagggtagctac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1606517 True 219 lncRNA 0.50 1 71262521 71262739

Neighbor

gene id symbol gene type direction distance location
LOC118939583 NA coding upstream 64488 71196255 ~ 71198225 (+)
LOC118939582 LOC106566316 coding upstream 69473 71103181 ~ 71193739 (+)
trnan-auu-2 NA coding upstream 264734 70997717 ~ 70997787 (+)
trnan-auu NA coding upstream 269058 70993393 ~ 70993463 (+)
trnat-agu-42 NA coding upstream 270134 70992314 ~ 70992387 (+)
LOC110491184 LOC106572946 coding downstream 23807 71286546 ~ 71362472 (+)
LOC110491185 LOC106566323 coding downstream 118616 71381355 ~ 71412264 (+)
LOC110517572 LOC106572960 coding downstream 156037 71418776 ~ 71500706 (+)
trnat-agu-71 NA coding downstream 286767 71549506 ~ 71549579 (+)
trnat-agu-72 NA coding downstream 287857 71550596 ~ 71550669 (+)
G1406502 NA non-coding upstream 53041 71209255 ~ 71209480 (+)
G1406501 NA non-coding upstream 55857 71206440 ~ 71206664 (+)
G1406426 NA non-coding upstream 60165 71201519 ~ 71202356 (+)
G1406521 NA non-coding downstream 2295 71265034 ~ 71265236 (+)
G1406522 NA non-coding downstream 2558 71265297 ~ 71265514 (+)
G1406523 NA non-coding downstream 4710 71267449 ~ 71267652 (+)
G1406526 NA non-coding downstream 8840 71271579 ~ 71271779 (+)
G1406528 NA non-coding downstream 9877 71272616 ~ 71272833 (+)
G1406510 NA other upstream 5544 71255979 ~ 71256977 (+)
G1406509 NA other upstream 10877 71251074 ~ 71251644 (+)
G1406508 NA other upstream 16498 71245573 ~ 71246023 (+)
G1406507 NA other upstream 46091 71214377 ~ 71216430 (+)
G1406505 NA other upstream 51757 71210272 ~ 71210764 (+)
G1406555 NA other downstream 150818 71413557 ~ 71416427 (+)
G1407190 NA other downstream 840647 72103386 ~ 72103841 (+)
G1407199 LOC106566391 other downstream 953574 72216313 ~ 72279555 (+)
ngrn ngrn other downstream 1379244 72641881 ~ 72646008 (+)
G1407509 NA other downstream 1503163 72765902 ~ 72769218 (+)

Expression


Co-expression Network