G1406519



Basic Information


Item Value
gene id G1406519
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71263526 ~ 71263750 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1606519
tcactggtcacccccaaagccaaatcctctttggccgcctttccttccagttctctgctgccaatgactggaacgaactgcaaaaatcgccaaagctggagactcttacctccctcactagctttaagcaccagctgtcagagcagctcacagatcattgcacctgtacatagcccatctgaaaatagcccatccaatctacctcatccccatactgttattatg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1606519 True 225 lncRNA 0.49 1 71263526 71263750

Neighbor


gene id symbol gene type direction distance location
trnah-gug-49 NA coding downstream 217925 71045530 ~ 71045601 (-)
trnat-agu-70 NA coding downstream 218942 71044511 ~ 71044584 (-)
trnat-agu-69 NA coding downstream 220318 71043135 ~ 71043208 (-)
trnat-agu-68 NA coding downstream 221694 71041759 ~ 71041832 (-)
trnat-agu-67 NA coding downstream 223055 71040398 ~ 71040471 (-)
LOC110492672 LOC106566404 coding upstream 478226 71741976 ~ 71764421 (-)
LOC118939604 NA coding upstream 542520 71806270 ~ 71806324 (-)
LOC118939585 NA coding upstream 579397 71843147 ~ 71850380 (-)
LOC110492674 rbm15 coding upstream 589107 71852857 ~ 71858795 (-)
alx3 LOC106566393 coding upstream 602600 71866350 ~ 71881855 (-)
G1406511 NA non-coding downstream 7343 71255964 ~ 71256183 (-)
G1406506 NA non-coding downstream 52765 71210249 ~ 71210761 (-)
G1406504 NA non-coding downstream 53632 71209559 ~ 71209894 (-)
G1406500 NA non-coding downstream 61188 71199077 ~ 71202338 (-)
G1406493 NA non-coding downstream 68430 71193862 ~ 71195096 (-)
G1406527 NA non-coding upstream 8575 71272325 ~ 71272537 (-)
G1406602 NA non-coding upstream 34003 71297753 ~ 71298363 (-)
G1406606 NA non-coding upstream 38799 71302549 ~ 71303632 (-)
G1406607 NA non-coding upstream 40595 71304345 ~ 71304753 (-)
G1406620 NA non-coding upstream 68443 71332193 ~ 71332498 (-)
G1406514 NA other downstream 2709 71260322 ~ 71260817 (-)
G1406228 NA other downstream 521347 70735647 ~ 70742179 (-)
LOC110492660 LOC106566428 other downstream 1042270 70216538 ~ 70221552 (-)
G1405917 NA other downstream 1167985 70078657 ~ 70095541 (-)
G1405172 NA other downstream 1745413 69517755 ~ 69518113 (-)
G1406752 NA other upstream 238729 71501118 ~ 71547366 (-)
G1406760 NA other upstream 276208 71539958 ~ 71543469 (-)
G1407628 NA other upstream 1068056 72331806 ~ 72332715 (-)
G1407755 NA other upstream 1171679 72435429 ~ 72437847 (-)
G1408615 NA other upstream 1967062 73230812 ~ 73232954 (-)

Expression



Co-expression Network