G1406522


Basic Information

Item Value
gene id G1406522
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71265297 ~ 71265514 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1606522
gtcctgtcctacacttcaacagaTAGCTACCccgtaccctgtcctgtcctatacTTCAACAGATAGCTACCccgtaccctgtcctgtcctgtcctatacTTCAACAGATAGCTACCCTGTTATccgtaccctgtcctgtcctacacttcaacagaTAGCTACCCCGTACCCCGTACCCCGTACCCTGTCCTATACTTCAACAGATAGCTACCCCGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1606522 True 218 lncRNA 0.51 1 71265297 71265514

Neighbor

gene id symbol gene type direction distance location
LOC118939583 NA coding upstream 67264 71196255 ~ 71198225 (+)
LOC118939582 LOC106566316 coding upstream 72249 71103181 ~ 71193739 (+)
trnan-auu-2 NA coding upstream 267510 70997717 ~ 70997787 (+)
trnan-auu NA coding upstream 271834 70993393 ~ 70993463 (+)
trnat-agu-42 NA coding upstream 272910 70992314 ~ 70992387 (+)
LOC110491184 LOC106572946 coding downstream 21032 71286546 ~ 71362472 (+)
LOC110491185 LOC106566323 coding downstream 115841 71381355 ~ 71412264 (+)
LOC110517572 LOC106572960 coding downstream 153262 71418776 ~ 71500706 (+)
trnat-agu-71 NA coding downstream 283992 71549506 ~ 71549579 (+)
trnat-agu-72 NA coding downstream 285082 71550596 ~ 71550669 (+)
G1406521 NA non-coding upstream 61 71265034 ~ 71265236 (+)
G1406517 NA non-coding upstream 2558 71262521 ~ 71262739 (+)
G1406502 NA non-coding upstream 55817 71209255 ~ 71209480 (+)
G1406501 NA non-coding upstream 58633 71206440 ~ 71206664 (+)
G1406426 NA non-coding upstream 62941 71201519 ~ 71202356 (+)
G1406523 NA non-coding downstream 1935 71267449 ~ 71267652 (+)
G1406526 NA non-coding downstream 6065 71271579 ~ 71271779 (+)
G1406528 NA non-coding downstream 7102 71272616 ~ 71272833 (+)
G1406529 NA non-coding downstream 7577 71273091 ~ 71273368 (+)
G1406531 NA non-coding downstream 9813 71275327 ~ 71371654 (+)
G1406510 NA other upstream 8320 71255979 ~ 71256977 (+)
G1406509 NA other upstream 13653 71251074 ~ 71251644 (+)
G1406508 NA other upstream 19274 71245573 ~ 71246023 (+)
G1406507 NA other upstream 48867 71214377 ~ 71216430 (+)
G1406505 NA other upstream 54533 71210272 ~ 71210764 (+)
G1406555 NA other downstream 148043 71413557 ~ 71416427 (+)
G1407190 NA other downstream 837872 72103386 ~ 72103841 (+)
G1407199 LOC106566391 other downstream 950799 72216313 ~ 72279555 (+)
ngrn ngrn other downstream 1376469 72641881 ~ 72646008 (+)
G1407509 NA other downstream 1500388 72765902 ~ 72769218 (+)

Expression


Co-expression Network