G1406556


Basic Information

Item Value
gene id G1406556
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71412967 ~ 71413312 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1606606
GGTGGGATGTGCTTCAATCTGAGGAGTTCAGAGCAGAAACATAAGGCCAAAGGGGGAGAAGAAATGAACCTCACTACTCAAATTTCAGTGCTGGTTCAAGTTGCTGAGAACGACAACTACCTTTGCATTTTCCTCCGCTAAGGATTGGGGgaagggaagctgatcctagatctgtacctagtgGAAACTTTACTCTGTAGCAGAAAGACTTAGAGTAGACCTGCCCGTGACAAAGATCACAAATATATAGTGACTCCGGAGGGGATGGCGGCTGTTTTACCTGCTCCTAAACAACtgtgcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1606606 True 346 lncRNA 0.46 1 71412967 71413312

Neighbor

gene id symbol gene type direction distance location
LOC110491185 LOC106566323 coding upstream 1954 71381355 ~ 71412264 (+)
LOC110491184 LOC106572946 coding upstream 50495 71286546 ~ 71362472 (+)
LOC118939583 NA coding upstream 214934 71196255 ~ 71198225 (+)
LOC118939582 LOC106566316 coding upstream 219919 71103181 ~ 71193739 (+)
trnan-auu-2 NA coding upstream 415180 70997717 ~ 70997787 (+)
LOC110517572 LOC106572960 coding downstream 5464 71418776 ~ 71500706 (+)
trnat-agu-71 NA coding downstream 136194 71549506 ~ 71549579 (+)
trnat-agu-72 NA coding downstream 137284 71550596 ~ 71550669 (+)
trnat-agu-73 NA coding downstream 141637 71554949 ~ 71555022 (+)
trnat-agu-74 NA coding downstream 142727 71556039 ~ 71556112 (+)
G1406573 NA non-coding upstream 33848 71378568 ~ 71379119 (+)
G1406531 NA non-coding upstream 41313 71275327 ~ 71371654 (+)
G1406571 NA non-coding upstream 54025 71357541 ~ 71358942 (+)
G1406547 NA non-coding upstream 109335 71302549 ~ 71303632 (+)
G1406555 NA non-coding downstream 2056 71413557 ~ 71416427 (+)
G1406672 NA non-coding downstream 15383 71428695 ~ 71429226 (+)
G1406688 NA non-coding downstream 75953 71489265 ~ 71489622 (+)
G1406690 NA non-coding downstream 83832 71497144 ~ 71498132 (+)
G1406510 NA other upstream 155990 71255979 ~ 71256977 (+)
G1406509 NA other upstream 161323 71251074 ~ 71251644 (+)
G1406508 NA other upstream 166944 71245573 ~ 71246023 (+)
G1406507 NA other upstream 196537 71214377 ~ 71216430 (+)
G1406505 NA other upstream 202203 71210272 ~ 71210764 (+)
G1407190 NA other downstream 690074 72103386 ~ 72103841 (+)
G1407199 LOC106566391 other downstream 803001 72216313 ~ 72279555 (+)
ngrn ngrn other downstream 1228671 72641881 ~ 72646008 (+)
G1407509 NA other downstream 1352590 72765902 ~ 72769218 (+)

Expression


Co-expression Network