G1406694


Basic Information

Item Value
gene id G1406694
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71428696 ~ 71431312 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1606783
agccaatatgctgtgataatgtattagaccaggcacatagccaatatgctgtgataatgtattaggccaggcacatagccaatatgctgtgataatgtattagaccaggcacatagccaacatgctgtgataatgtattagaccaggcacatagccaacatgctgtgataatgtattagaccaggcacatagccaatatgctgtgataatgtattaggccaggcacatagccaatatgctgtgataatgtattagaccaggcacatagccaacatgctgtgataatgtattagaccaggcacatagccaatatgctgtgataatgtattagaccaggcacatagccaatatgctgtgataatgtattagaccaggcacatagccaacatgctgtgataatgtattagaccaggcatatagccaatatgctgtgataatgtattaggccaggcacatagccaacatgctgtgataatgtattaggccaggcacatagccaatatgctgtgataatgtattagaccaggcacatagccaacatgctgtgataatgtattagaccaggcacatagccaatatgctgtgataatgtattaggccaggcacatagccaacatgctgtgataatgtattagaccaggcatatagccaatatgctgtgataatgtattaggccaggcacatagccaatatgctgtgataatgtattagaccaggcatatagccaatatgctgtgataatgtattagaccaggcatatagccaatatgctgtgataatgtattagaccaggcatatagccaacatgctgtgataatgtattagaccaggcatatagccaatatgctgtgataatgtattaggccaggcacatagccaatatgctgtgataatgtattagaccaggcatatagccagcatgctgtgataatgtattaggccaggcacatagccaacatgctgtgataatgtattagaccaggcatatagccaatatgctgtgataatgtattaggccaggcacatagccaatatgctgtgataatgtattaggccaggcacatagccaatatgctgtgataatgtattaggccaggcacatagccaatatgctgtgataatgtattagaccaggcacatagccaacatgctgtgataatg
>TU1606784
AAATAGTTTGGAACGGTCATCCAACACGCAAGCATCTTTCTACAGCAGACCTGAAGTTCACGGGCATCACGATTTGACTTTTCCCAGAGTTCCCTGTTCTCTTAAATACCATCAGATGCATGAACATCAgtctagtaaaataaaaagctaATGATTTGAGCAAATGATGCTcagctgtgataatgtattagatcAGGCATATAGCCaacatgctgtgataatgtattagaccaggcatatagccaatatgctgtgataatgtattagaccaggcatatagccaatatgctgtgataatgtattagaccaggcatatagccaatatgctgtgataatgtattagaccaggcatatagccaatatgctgtgataatgtattagaccaggcatatagccaacatgctgtgataatgtattagaccaggcatatagccaacatgctgtgataatgtattagaccaggcatatagccaatatgctgtgacaATGTATTAAgccaggcacatagccaatatgctgtgataatgtattaggccaggcacatagccaatatgctgtgataatgtattagaccaggcacatagccaatatgctgtgataatgtattaggccaggcacatagccaatatgctgtgataatgtattaggccaggcacatagccaatatgctgtgataatgtattagaccaggcacatagccaacatgctgtgataatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1606783 False 1161 lncRNA 0.41 2 71428696 71430160
TU1606784 True 717 lncRNA 0.39 3 71428696 71431312

Neighbor

gene id symbol gene type direction distance location
trnah-gug-49 NA coding downstream 383095 71045530 ~ 71045601 (-)
trnat-agu-70 NA coding downstream 384112 71044511 ~ 71044584 (-)
trnat-agu-69 NA coding downstream 385488 71043135 ~ 71043208 (-)
trnat-agu-68 NA coding downstream 386864 71041759 ~ 71041832 (-)
trnat-agu-67 NA coding downstream 388225 71040398 ~ 71040471 (-)
LOC110492672 LOC106566404 coding upstream 310664 71741976 ~ 71764421 (-)
LOC118939604 NA coding upstream 374958 71806270 ~ 71806324 (-)
LOC118939585 NA coding upstream 411835 71843147 ~ 71850380 (-)
LOC110492674 rbm15 coding upstream 421545 71852857 ~ 71858795 (-)
alx3 LOC106566393 coding upstream 435038 71866350 ~ 71881855 (-)
G1406649 LOC106566323 non-coding downstream 40985 71382839 ~ 71387711 (-)
G1406651 NA non-coding downstream 42733 71384608 ~ 71385963 (-)
G1406644 NA non-coding downstream 51070 71377415 ~ 71377626 (-)
G1406643 NA non-coding downstream 54090 71374252 ~ 71374606 (-)
G1406642 NA non-coding downstream 65229 71362903 ~ 71363467 (-)
G1406705 NA non-coding upstream 57956 71489268 ~ 71489622 (-)
G1406752 NA non-coding upstream 69806 71501118 ~ 71547366 (-)
G1406762 NA non-coding upstream 119763 71551075 ~ 71551546 (-)
G1406764 NA non-coding upstream 125259 71556571 ~ 71556854 (-)
G1406765 NA non-coding upstream 125942 71557254 ~ 71557499 (-)
G1406514 NA other downstream 167879 71260322 ~ 71260817 (-)
G1406228 NA other downstream 686517 70735647 ~ 70742179 (-)
LOC110492660 LOC106566428 other downstream 1207440 70216538 ~ 70221552 (-)
G1405917 NA other downstream 1333155 70078657 ~ 70095541 (-)
G1405172 NA other downstream 1910583 69517755 ~ 69518113 (-)
G1406760 NA other upstream 108646 71539958 ~ 71543469 (-)
G1407628 NA other upstream 900494 72331806 ~ 72332715 (-)
G1407755 NA other upstream 1004117 72435429 ~ 72437847 (-)
G1408615 NA other upstream 1799500 73230812 ~ 73232954 (-)

Expression


Co-expression Network