Gene
RNA
| Item | Value |
|---|---|
| gene id | G1406690 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 71497144 ~ 71498132 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1606779 | False | 387 | lncRNA | 0.37 | 4 | 71497144 | 71498132 |
| TU1606776 | True | 325 | lncRNA | 0.38 | 2 | 71497654 | 71498132 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491185 | LOC106566323 | coding | upstream | 86131 | 71381355 ~ 71412264 (+) |
| LOC110491184 | LOC106572946 | coding | upstream | 134672 | 71286546 ~ 71362472 (+) |
| LOC118939583 | NA | coding | upstream | 299111 | 71196255 ~ 71198225 (+) |
| LOC118939582 | LOC106566316 | coding | upstream | 304096 | 71103181 ~ 71193739 (+) |
| trnan-auu-2 | NA | coding | upstream | 499357 | 70997717 ~ 70997787 (+) |
| trnat-agu-71 | NA | coding | downstream | 51374 | 71549506 ~ 71549579 (+) |
| trnat-agu-72 | NA | coding | downstream | 52464 | 71550596 ~ 71550669 (+) |
| trnat-agu-73 | NA | coding | downstream | 56817 | 71554949 ~ 71555022 (+) |
| trnat-agu-74 | NA | coding | downstream | 57907 | 71556039 ~ 71556112 (+) |
| trnat-agu-75 | NA | coding | downstream | 62272 | 71560249 ~ 71560716 (+) |
| G1406688 | NA | non-coding | upstream | 7522 | 71489265 ~ 71489622 (+) |
| G1406672 | NA | non-coding | upstream | 67918 | 71428695 ~ 71429226 (+) |
| G1406555 | NA | non-coding | upstream | 80766 | 71413557 ~ 71416427 (+) |
| G1406556 | NA | non-coding | upstream | 83832 | 71412967 ~ 71413312 (+) |
| G1406710 | NA | non-coding | downstream | 4438 | 71502570 ~ 71503594 (+) |
| G1406739 | NA | non-coding | downstream | 39795 | 71537927 ~ 71541379 (+) |
| G1406773 | NA | non-coding | downstream | 105739 | 71603871 ~ 71606427 (+) |
| G1406785 | NA | non-coding | downstream | 121415 | 71619547 ~ 71619958 (+) |
| G1406510 | NA | other | upstream | 240167 | 71255979 ~ 71256977 (+) |
| G1406509 | NA | other | upstream | 245500 | 71251074 ~ 71251644 (+) |
| G1406508 | NA | other | upstream | 251121 | 71245573 ~ 71246023 (+) |
| G1406507 | NA | other | upstream | 280714 | 71214377 ~ 71216430 (+) |
| G1407190 | NA | other | downstream | 605254 | 72103386 ~ 72103841 (+) |
| G1407199 | LOC106566391 | other | downstream | 718181 | 72216313 ~ 72279555 (+) |
| ngrn | ngrn | other | downstream | 1143851 | 72641881 ~ 72646008 (+) |
| G1407509 | NA | other | downstream | 1267770 | 72765902 ~ 72769218 (+) |
| LOC110492598 | LOC106566362 | other | downstream | 1310598 | 72808730 ~ 72818165 (+) |
