XLOC_003306 (BX000700.25)


Basic Information

Item Value
gene id XLOC_003306
gene name BX000700.25
gene type misc
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 12516933 ~ 12517229 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006482
GCCGGGTTAAGTGGCGCGCGCCTGTAATCCAAGCTACTGGGAGGCTGAGGCTGCGGatcgcttgagctcagggcttctggGCTGCAGTGGACTATGTTGATCGGGTGTCCGCTCTAAGTTCGGTATCGATATGGTTCTCCTGGGAGAGCTCGGGACCACCAGGTCGTTTAAGGAGGGGTGAACCGGCCCAGGTCGGAGACGGAGCAGGTCAAATCCCCCGTGCTGATCAGTAGTGGGATCGCGCCTGTGAATAGACACTGCAGTGCAGCCTGAgcgacacagagagacgcagacttT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116328

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006482 True 297 misc_RNA 0.59 1 12516933 12517229

Neighbor

gene id symbol gene type direction distance location
XLOC_003304 NA coding upstream 22756 12493872 ~ 12494177 (+)
XLOC_003302 NA coding upstream 49873 12466766 ~ 12467060 (+)
XLOC_003284 si:ch211-156l18.7 coding upstream 332390 12175162 ~ 12184543 (+)
XLOC_003282 NA coding upstream 350143 12166486 ~ 12166790 (+)
XLOC_003280 si:ch211-156l18.8 coding upstream 424755 12052791 ~ 12092178 (+)
XLOC_003307 NA coding downstream 5541 12522770 ~ 12523029 (+)
XLOC_003319 NA coding downstream 200880 12718109 ~ 12718402 (+)
XLOC_003320 ap1s2 coding downstream 202715 12719944 ~ 12728353 (+)
XLOC_003321 rbb4l coding downstream 227346 12744575 ~ 12770546 (+)
XLOC_003322 NA coding downstream 264986 12782215 ~ 12785059 (+)
XLOC_003305 BX000700.11 misc upstream 14086 12502551 ~ 12502847 (+)
XLOC_003303 BX000700.1 misc upstream 41231 12475442 ~ 12475702 (+)
XLOC_003301 BX000700.13 misc upstream 75981 12440656 ~ 12440952 (+)
XLOC_003300 BX000700.15 misc upstream 84668 12431978 ~ 12432265 (+)
XLOC_003299 BX000700.2 misc upstream 110918 12405730 ~ 12406015 (+)
XLOC_003308 BX000700.26 misc downstream 19055 12536284 ~ 12536580 (+)
XLOC_003309 BX000700.4 misc downstream 24810 12542039 ~ 12542334 (+)
XLOC_003310 CABZ01022569.4 misc downstream 50758 12567987 ~ 12568283 (+)
XLOC_003311 CABZ01022569.5 misc downstream 61303 12578532 ~ 12578828 (+)
XLOC_003312 CABZ01022569.3 misc downstream 76342 12593571 ~ 12593867 (+)
XLOC_003278 NA non-coding upstream 613423 11891240 ~ 11903510 (+)
XLOC_003276 NA non-coding upstream 640803 11839827 ~ 11876130 (+)
XLOC_003329 CR847923.1 non-coding downstream 634690 13151919 ~ 13152385 (+)
XLOC_003332 NA non-coding downstream 676494 13193723 ~ 13194597 (+)

Expression


Co-expression Network