G1406792


Basic Information

Item Value
gene id G1406792
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71636641 ~ 71636860 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1606938
AATCtagctccctgcctgcctgtctcctgcCTACTCAATGTTATGTAAGTGAGTGTCAGAGCACAGTACACCATCTGGGACCTcttactgtagctctctctctgtctctctctctgtctctctctctgtctctctctccctctgtctctctctctctgtctctctctccctgtctctctctccctctgtctctctctctctccctctctctctctatttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1606938 True 220 lncRNA 0.51 1 71636641 71636860

Neighbor

gene id symbol gene type direction distance location
trnat-cgu-15 NA coding upstream 19244 71617324 ~ 71617397 (+)
trnah-gug-50 NA coding upstream 19828 71616742 ~ 71616813 (+)
trnat-agu-101 NA coding upstream 24535 71612033 ~ 71612106 (+)
trnat-agu-100 NA coding upstream 25625 71610943 ~ 71611016 (+)
trnat-agu-99 NA coding upstream 26701 71609867 ~ 71609940 (+)
LOC110491174 LOC106566400 coding downstream 4440 71641300 ~ 71654811 (+)
LOC110492670 LOC106566399 coding downstream 64091 71700951 ~ 71708557 (+)
LOC110492669 LOC106566398 coding downstream 72176 71709036 ~ 71736940 (+)
LOC110492671 LOC106566405 coding downstream 100540 71737400 ~ 71741130 (+)
xip xip coding downstream 138032 71774892 ~ 71781803 (+)
G1406787 NA non-coding upstream 11505 71624871 ~ 71625136 (+)
G1406786 NA non-coding upstream 11817 71624599 ~ 71624824 (+)
G1406785 NA non-coding upstream 16683 71619547 ~ 71619958 (+)
G1406773 NA non-coding upstream 30214 71603871 ~ 71606427 (+)
trnat-agu-75 NA non-coding upstream 75925 71560249 ~ 71560716 (+)
G1406800 NA non-coding downstream 24088 71660948 ~ 71661402 (+)
G1406803 NA non-coding downstream 29480 71666340 ~ 71666736 (+)
G1406806 NA non-coding downstream 36338 71673198 ~ 71673421 (+)
G1406809 NA non-coding downstream 46670 71683530 ~ 71683792 (+)
G1406555 NA other upstream 220214 71413557 ~ 71416427 (+)
G1406510 NA other upstream 379664 71255979 ~ 71256977 (+)
G1406509 NA other upstream 384997 71251074 ~ 71251644 (+)
G1406508 NA other upstream 390618 71245573 ~ 71246023 (+)
G1406507 NA other upstream 420211 71214377 ~ 71216430 (+)
G1407190 NA other downstream 466526 72103386 ~ 72103841 (+)
G1407199 LOC106566391 other downstream 579453 72216313 ~ 72279555 (+)
ngrn ngrn other downstream 1005123 72641881 ~ 72646008 (+)
G1407509 NA other downstream 1129042 72765902 ~ 72769218 (+)
LOC110492598 LOC106566362 other downstream 1171870 72808730 ~ 72818165 (+)

Expression


Co-expression Network