Gene
RNA
| Item | Value |
|---|---|
| gene id | G1406918 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 71663004 ~ 71663240 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrotransposable element Tf2 protein type 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1607092 | True | 237 | lncRNA | 0.56 | 1 | 71663004 | 71663240 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnah-gug-49 | NA | coding | downstream | 617403 | 71045530 ~ 71045601 (-) |
| trnat-agu-70 | NA | coding | downstream | 618420 | 71044511 ~ 71044584 (-) |
| trnat-agu-69 | NA | coding | downstream | 619796 | 71043135 ~ 71043208 (-) |
| trnat-agu-68 | NA | coding | downstream | 621172 | 71041759 ~ 71041832 (-) |
| trnat-agu-67 | NA | coding | downstream | 622533 | 71040398 ~ 71040471 (-) |
| LOC110492672 | LOC106566404 | coding | upstream | 78736 | 71741976 ~ 71764421 (-) |
| LOC118939604 | NA | coding | upstream | 143030 | 71806270 ~ 71806324 (-) |
| LOC118939585 | NA | coding | upstream | 179907 | 71843147 ~ 71850380 (-) |
| LOC110492674 | rbm15 | coding | upstream | 189617 | 71852857 ~ 71858795 (-) |
| alx3 | LOC106566393 | coding | upstream | 203110 | 71866350 ~ 71881855 (-) |
| G1406916 | NA | non-coding | downstream | 3701 | 71655519 ~ 71659303 (-) |
| G1406915 | NA | non-coding | downstream | 7929 | 71654289 ~ 71655075 (-) |
| G1406904 | LOC106572854 | non-coding | downstream | 20084 | 71641645 ~ 71642920 (-) |
| G1406902 | NA | non-coding | downstream | 28725 | 71634068 ~ 71634279 (-) |
| G1406901 | NA | non-coding | downstream | 32264 | 71630490 ~ 71630740 (-) |
| G1406924 | NA | non-coding | upstream | 10353 | 71673593 ~ 71673876 (-) |
| G1406933 | NA | non-coding | upstream | 26584 | 71689824 ~ 71690145 (-) |
| G1406936 | NA | non-coding | upstream | 29117 | 71692357 ~ 71692615 (-) |
| G1406938 | NA | non-coding | upstream | 30476 | 71693716 ~ 71693967 (-) |
| G1406943 | NA | non-coding | upstream | 35745 | 71698985 ~ 71700138 (-) |
| G1406752 | NA | other | downstream | 117159 | 71501118 ~ 71547366 (-) |
| G1406760 | NA | other | downstream | 119535 | 71539958 ~ 71543469 (-) |
| G1406514 | NA | other | downstream | 402187 | 71260322 ~ 71260817 (-) |
| G1406228 | NA | other | downstream | 920825 | 70735647 ~ 70742179 (-) |
| LOC110492660 | LOC106566428 | other | downstream | 1441748 | 70216538 ~ 70221552 (-) |
| G1407628 | NA | other | upstream | 668566 | 72331806 ~ 72332715 (-) |
| G1407755 | NA | other | upstream | 772189 | 72435429 ~ 72437847 (-) |
| G1408615 | NA | other | upstream | 1567572 | 73230812 ~ 73232954 (-) |
| ppdpfb | LOC106566296 | other | upstream | 2106616 | 73769856 ~ 73777432 (-) |
| rps21 | LOC106572905 | other | upstream | 2509633 | 74172873 ~ 74182639 (-) |
