XLOC_033061



Basic Information


Item Value
gene id XLOC_033061
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40659954 ~ 40661324 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00065212
TAAAAGTGTCTACAACTAGACAAAAACTTCCAGATATTTGAATGGAGATCAGTGGAGAATTCGGCTTTCTGAGCAGCCATGCGCTCTCTTGAGGAAAACAGGGGGAATGTGATGCAATGACAAGACGCACAATAGAGTGTTTGTGTGCTGGAGAATCCTGGCAACTCCTTCCCTTGGGCCAGTAATCCCTCAGGTACAAGGTATCTCAGGAGGCCTTCCTGACAGCCAGCTGATCCCCATGTTTCTCCATCCTCTCGCCTCACAAATCAGACCCCAGAGATCTCATTAACAATCCACACAGGCTTGTGGATGTGGTGAGGCATTGACCTGTTGCCTGGGTTACAGTGCAGTCCCTGTGTCCCAGCATAAACTCCAGCTGAAGCTGGAAGTCTCAGATCCTTTGTTCTAACTCCATATTCTGAATTGTAATTTTAGAAAAAATAGGCAAAATGTACAGTAAATCTAGATTTTTACTGACTGAACAAGTTAAGCATCAAAATAGCATCAGAAACTagcacagttattttaaacaattattactTTATAGGGATCTTAAATACAAAtagatacaaaaacaaacaaacaaacaataatctTTTAAATCATTCACTAATTTGTAAATTAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00065212 True 625 lncRNA 0.40 3 40659954 40661324

Neighbor


gene id symbol gene type direction distance location
XLOC_033057 ppil1 coding downstream 854 40647788 ~ 40659100 (-)
XLOC_033060 dre-mir-200c coding downstream 3666 40656204 ~ 40656288 (-)
XLOC_033059 dre-mir-141 coding downstream 3869 40656003 ~ 40656085 (-)
XLOC_033058 dre-mir-429b coding downstream 6716 40653129 ~ 40653238 (-)
XLOC_033056 NA coding downstream 30793 40625631 ~ 40629161 (-)
XLOC_033062 CR450814.2 coding upstream 6023 40667347 ~ 40667463 (-)
XLOC_033063 si:ch211-157b11.14 coding upstream 28033 40689357 ~ 40697585 (-)
XLOC_033064 si:ch211-157b11.12 coding upstream 45838 40707162 ~ 40713204 (-)
XLOC_033065 kbtbd12 coding upstream 54313 40715637 ~ 40722480 (-)
XLOC_033066 p4htm coding upstream 69545 40730869 ~ 40744726 (-)
XLOC_033055 CU855953.1 non-coding downstream 34534 40625304 ~ 40625420 (-)
XLOC_033070 CR450814.1 non-coding upstream 134574 40795898 ~ 40819766 (-)
XLOC_033074 NA non-coding upstream 194815 40856139 ~ 40864078 (-)
XLOC_033076 CR293534.1 non-coding upstream 285033 40946357 ~ 40946475 (-)
XLOC_033077 NA non-coding upstream 302362 40963686 ~ 40968341 (-)

Expression



Co-expression Network