G1407646



Basic Information


Item Value
gene id G1407646
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 72178133 ~ 72184010 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1607996
cggGTTGTTAAAAGAGAACAGAATTTAATATCGAACTGCCTGAAattcatacaaattccgcacgatggcgccattgtcctcattttcaattgaattaattgttggaaaatccatctatctgacctccaTTTtcccagtcttcacccggatgtaGTTGATGAAGACATTAGAAGCCATTGTTTTGCAAGTGAAGACCTACTGAAaatacatcgccctgtaatcattttgatagattataaacgtttactaatacctaaagttggattacaaaaggatttcgaagtgttttgtgaaagtttatcgtcgacttttttaatttaaaaaaattacgcagcgtttaaaaacaatgtttttttctgaatgacacagcttccatacaaagctattttgggtatatatggaccgatttaaacgaaaaaaagacccaatagtgatgtttatggggcatataggagtgccaagaaagaagctcgtcaaaggtaatgaatgttttatattttatttctgcgttttgggtagcgccggctaccgcaaaatctgttgtttacgtgtcgtgctggcattttggggggtgcatgctatcagataatagcttctcatgctttcgccgaaaagcattttaaaaatctgacttgctggctaggttcacaacgagtgtagctttaattcaataccctgcttgtgaattttgatcaaggtttgagttgtaacgagtacatttagcatttagcgtagcgcatttgcatttccaggtgcctacttgagacgtctgcgtctcaagtatgGTCAAGAAGTT

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1607996 True 796 lncRNA 0.38 2 72178133 72184010

Neighbor


gene id symbol gene type direction distance location
trnat-agu-136 NA coding downstream 143511 72034549 ~ 72034622 (-)
trnah-gug-89 NA coding downstream 143859 72034203 ~ 72034274 (-)
trnat-cgu-54 NA coding downstream 144436 72033624 ~ 72033697 (-)
trnat-cgu-53 NA coding downstream 145361 72032699 ~ 72032772 (-)
trnah-gug-88 NA coding downstream 145709 72032353 ~ 72032424 (-)
LOC110492679 LOC106592833 coding upstream 18767 72202777 ~ 72207681 (-)
LOC118936314 nattl coding upstream 32304 72216314 ~ 72224253 (-)
LOC110492680 nattl coding upstream 94705 72278715 ~ 72285363 (-)
LOC110492684 NA coding upstream 140635 72324645 ~ 72326840 (-)
kcnc4 kcnc4 coding upstream 282636 72466646 ~ 72533135 (-)
G1407619 NA non-coding downstream 25351 72152533 ~ 72152782 (-)
G1407612 NA non-coding downstream 36109 72131627 ~ 72142024 (-)
G1407603 NA non-coding downstream 62743 72115113 ~ 72115390 (-)
G1407602 NA non-coding downstream 63389 72114463 ~ 72114744 (-)
G1407181 NA non-coding downstream 80173 72097613 ~ 72097960 (-)
G1407631 NA non-coding upstream 16505 72200515 ~ 72201470 (-)
G1407719 NA non-coding upstream 180134 72364144 ~ 72423225 (-)
G1407728 LOC106566388 non-coding upstream 187538 72371548 ~ 72381911 (-)
G1407717 NA non-coding upstream 242788 72426798 ~ 72428838 (-)
G1407755 NA non-coding upstream 251419 72435429 ~ 72437847 (-)
G1406752 NA other downstream 632288 71501118 ~ 71547366 (-)
G1406760 NA other downstream 634664 71539958 ~ 71543469 (-)
G1406514 NA other downstream 917316 71260322 ~ 71260817 (-)
G1406228 NA other downstream 1435954 70735647 ~ 70742179 (-)
LOC110492660 LOC106566428 other downstream 1956877 70216538 ~ 70221552 (-)
G1407628 NA other upstream 147796 72331806 ~ 72332715 (-)
G1408615 NA other upstream 1046802 73230812 ~ 73232954 (-)
ppdpfb LOC106566296 other upstream 1585846 73769856 ~ 73777432 (-)
rps21 LOC106572905 other upstream 1988863 74172873 ~ 74182639 (-)

Expression



Co-expression Network