G1407628


Basic Information

Item Value
gene id G1407628
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 72331806 ~ 72332715 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1607973
CACTTTGACCGACACATTCAAGGTGGATTCTATCTTGTTGCTGACAGACCAGGAGGAAGTCTTGGTCAGGGTCTTGCTGCATGTAATGGACTCTTCTTGAACCAATGAGGTGTCATTGTGGTGGGACACGGATTTCACATATTCTGGACTCACCTGGGGTTTGAAGAGGGACAGGGTGGGATACTCCATGTCGGTCAGCACGGACGACTTGATGGTGTTGATGAAGAGGAAGCCCATGCAGTCAATGTCTGAGCCATACCTGCCCTGCAGCCCCAGGCAGATTCCAGACCCCACATCTATGGTGTACTCAGTCTTCAGTCCCCAGCTGGTCATTTTTTCAAAGAACTCCCGGTTCTCACTCGTCGTGAACTTGATGGCACCCAGACGTGTGCCGACACCGTTACCCCATAGAGACAGCTTGGTGATGCGCTCGCCGAGGTACAACTCAAACTCAAAATTTCCAAAGGTCTCAACGGCGCCCATCGGTCAGCTCCGCCCGCACAGCTTTCACCTGCCAGCCTTCCACCGCCACTCCGATCTTCTTGAGGGTGGCACTGTTGTTCATGCCGTGGAATTCAAATGGACTGCCTCCTCCACCACCGATCAACTGCAGTCTGGTTGCcatgttaagtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1607973 True 633 TUCP 0.53 2 72331806 72332715

Neighbor

gene id symbol gene type direction distance location
LOC110492684 NA coding downstream 4966 72324645 ~ 72326840 (-)
LOC110492680 nattl coding downstream 46443 72278715 ~ 72285363 (-)
LOC118936314 nattl coding downstream 107553 72216314 ~ 72224253 (-)
LOC110492679 LOC106592833 coding downstream 124125 72202777 ~ 72207681 (-)
trnat-agu-136 NA coding downstream 297184 72034549 ~ 72034622 (-)
kcnc4 kcnc4 coding upstream 133931 72466646 ~ 72533135 (-)
hspa1b LOC106566386 coding upstream 203713 72536428 ~ 72540025 (-)
LOC110492690 LOC106566363 coding upstream 207720 72540435 ~ 72611247 (-)
LOC110492693 LOC105029198 coding upstream 288011 72620726 ~ 72641373 (-)
LOC110492692 LOC106566365 coding upstream 313302 72646017 ~ 72683627 (-)
G1407631 NA non-coding downstream 130336 72200515 ~ 72201470 (-)
G1407646 NA non-coding downstream 147796 72178133 ~ 72184010 (-)
G1407619 NA non-coding downstream 179024 72152533 ~ 72152782 (-)
G1407612 NA non-coding downstream 189782 72131627 ~ 72142024 (-)
G1407603 NA non-coding downstream 216416 72115113 ~ 72115390 (-)
G1407719 NA non-coding upstream 31429 72364144 ~ 72423225 (-)
G1407728 LOC106566388 non-coding upstream 38833 72371548 ~ 72381911 (-)
G1407717 NA non-coding upstream 94083 72426798 ~ 72428838 (-)
G1407755 NA non-coding upstream 102714 72435429 ~ 72437847 (-)
G1407763 NA non-coding upstream 115416 72448131 ~ 72448971 (-)
G1406752 NA other downstream 785961 71501118 ~ 71547366 (-)
G1406760 NA other downstream 788337 71539958 ~ 71543469 (-)
G1406514 NA other downstream 1070989 71260322 ~ 71260817 (-)
G1406228 NA other downstream 1589627 70735647 ~ 70742179 (-)
LOC110492660 LOC106566428 other downstream 2110550 70216538 ~ 70221552 (-)
G1408615 NA other upstream 898097 73230812 ~ 73232954 (-)
ppdpfb LOC106566296 other upstream 1437141 73769856 ~ 73777432 (-)
rps21 LOC106572905 other upstream 1840158 74172873 ~ 74182639 (-)
G1409044 NA other upstream 1862810 74195525 ~ 74195951 (-)

Expression


Co-expression Network