G1407371


Basic Information

Item Value
gene id G1407371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 72441633 ~ 72509161 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1607647
actttgcacattcttccattgcaaaactaccattccagtgttttacttgctatattgtatttaccttgccaccaaggcctttttttgcctttacctcccttctcacctcatttgctcacattgtatatagacttgtttatactttattattgactgtatgtttgttttactccatgtgtaactctgtgttgttgtctgttcacactgctatgctttatcttggccaggtcgcagttgtaaatgagaacttgttctcaactagcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1607647 True 264 lncRNA 0.38 2 72441633 72509161

Neighbor

gene id symbol gene type direction distance location
LOC110491175 LOC106566388 coding upstream 22273 72371494 ~ 72419360 (+)
LOC110492916 LOC106592833 coding upstream 108301 72236985 ~ 72333332 (+)
LOC110492683 nattl coding upstream 176878 72263336 ~ 72264755 (+)
LOC118939586 NA coding upstream 178426 72235921 ~ 72263207 (+)
LOC110492682 LOC106592833 coding upstream 192127 72246162 ~ 72249506 (+)
ngrn ngrn coding downstream 132720 72641881 ~ 72646008 (+)
sypl2b LOC106566367 coding downstream 193277 72702438 ~ 72709614 (+)
LOC118939587 NA coding downstream 197172 72706333 ~ 72707004 (+)
amigo1 LOC106566368 coding downstream 244922 72754083 ~ 72768074 (+)
LOC118939588 NA coding downstream 257381 72766542 ~ 72769227 (+)
G1407367 NA non-coding upstream 4622 72435238 ~ 72437011 (+)
G1407366 NA non-coding upstream 8937 72429808 ~ 72432696 (+)
G1407323 NA non-coding upstream 12589 72426596 ~ 72429044 (+)
G1407359 NA non-coding upstream 36083 72405112 ~ 72405550 (+)
G1407433 NA non-coding downstream 31275 72540436 ~ 72542791 (+)
G1407453 NA non-coding downstream 88196 72597357 ~ 72701589 (+)
G1407430 NA non-coding downstream 109477 72618638 ~ 72619634 (+)
G1407472 NA non-coding downstream 147849 72657010 ~ 72657362 (+)
G1407485 LOC106566365 non-coding downstream 162110 72671271 ~ 72683597 (+)
G1407199 LOC106566391 other upstream 162078 72216313 ~ 72279555 (+)
G1407190 NA other upstream 337792 72103386 ~ 72103841 (+)
G1406555 NA other upstream 1025206 71413557 ~ 71416427 (+)
G1406510 NA other upstream 1184656 71255979 ~ 71256977 (+)
G1406509 NA other upstream 1189989 71251074 ~ 71251644 (+)
G1407509 NA other downstream 256741 72765902 ~ 72769218 (+)
LOC110492598 LOC106566362 other downstream 299569 72808730 ~ 72818165 (+)
LOC110491159 LOC105013496 other downstream 316360 72824995 ~ 72894201 (+)
G1407566 NA other downstream 402822 72911983 ~ 72929719 (+)

Expression


Co-expression Network