G1407433


Basic Information

Item Value
gene id G1407433
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 72540436 ~ 72542791 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1607719
AAACGTATATTTCTGTTTATTAATTATAGGATGAGCTTATTGCTGCTATATCATACATCCAGTTACAACAATcacaagtataaataatttagatGATCAACATAAGCAAGTGAAAGCAGAAATCACCACAAGGCATGTCTGTCAACATACGACTTAAAAATCAACAGAACCATTAAGCGACAGCAGAACAGTTTCTATGAGAGACTTTACAAATCAACTTGGACAAACTGTGCTTTTAAATCTATAAAATAGAGAAGAATTTCAAACATAACAAATAGCCACGAATGAAACTTAACATTGAGATGAACTGATAGCAAGTGGCTGTGAAGACACATCGACTCTCTGCTTAATGACACGTAGCTTCTTCAGTGCTTCACCAGACATTAAAACAGTCCAGTTAGGATCACAAACACAATTCTGGCTCATGGAATGTACTTAATTTaaaatgtcagtgtgtgtgtacacagtaaCAGTGACATATTGACATTAATGAACATTGTGATTGTGACTAAATTAATACTTCAAGAGATTTAAAGGATAGCCAGCAGACTAAAATTATATGACTAACATTTTTAATGGTTACTTCTCTTGGCCtaagtcccaaatgacaccctattccctatgtagtgcactactacccataggctctggtcaaaagtagtgcactacaaatgaaatagggtgccatttggaacatgtACTTGGTCTCTGCTGTTTGATATGCATGGTTAGATTAATGCACCCGACAGACAAGTTAGATATAATCAATATTATTATGCGTGACAATGTTAATAATAACATTTACATTCAGCAAAAGCAAAATGATTATTATTCTTCCCTTTTGTAATAACTTATCAAATAAAATAGAGATATTATATTCACTTATTCCATATGTTGTTGCTTGCAGGTCACCGCGTTGTCCATTTCCATTAATACTGTAGTAGTTGGGTTTGAAGGGTCCATTCTTGTTCAGGCCCATGTATTTGGCCTGCTCGTCagacagctctgtcaggtgggcGTCAAAGTTGGGCATGTGCAAGCTGGCCACGTACTCATCTGGATGGAAGACACAGGTGGATTGTGAAGAGGAACGCCTCTTTTGTAGTTCACTACTTACAGCACACACATACTTGTTAGGAAAAATGGAGCGTCGTGTGTAAAAAGAAAACACTAGGTGGCGACGTCGAGCCACATACAACAAACTGCCCATTGAAACCTATGCGGTACACATTTATCACATGAATTCATGAAAATTTTCACCAATAAGGCTCAGTCAGAGACTACTTGTATGTATGCAGATCAATGGTCTGctcctcaaatggcaccctattcactacatagtgcactaactttgaccagagccctatggcctggtccaaagtaatgcactataaaaGGGAATATAGGGTGCCATTACGGACGGGCCCAGGTCTTACCCATTTTCTTAGGCAGCAGATAGACGTCCTGTTTGTAGCGTCCCTCGGGAGCATTGAACAGCTCAATCAGAGCCAGGGCCTGCGGAGAGACACAGACCACCACAGAGTCTCAACGCTgccaacatcccattcccacaaagCTCAGGTAACAGCAAAACAACAGGAGAGCAGGAGATATCCTAACTCAAGTCTCGTCTTCAGCAAACCTCTAAAGCAACAAGTATgactagtaaaaaaaaaaacctcaGCATTTTCACATTCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1607719 True 1698 lncRNA 0.40 2 72540436 72542791

Neighbor

gene id symbol gene type direction distance location
LOC110491175 LOC106566388 coding upstream 121076 72371494 ~ 72419360 (+)
LOC110492916 LOC106592833 coding upstream 207104 72236985 ~ 72333332 (+)
LOC110492683 nattl coding upstream 275681 72263336 ~ 72264755 (+)
LOC118939586 NA coding upstream 277229 72235921 ~ 72263207 (+)
LOC110492682 LOC106592833 coding upstream 290930 72246162 ~ 72249506 (+)
ngrn ngrn coding downstream 99090 72641881 ~ 72646008 (+)
sypl2b LOC106566367 coding downstream 159647 72702438 ~ 72709614 (+)
LOC118939587 NA coding downstream 163542 72706333 ~ 72707004 (+)
amigo1 LOC106566368 coding downstream 211292 72754083 ~ 72768074 (+)
LOC118939588 NA coding downstream 223751 72766542 ~ 72769227 (+)
G1407371 NA non-coding upstream 31275 72441633 ~ 72509161 (+)
G1407367 NA non-coding upstream 103425 72435238 ~ 72437011 (+)
G1407366 NA non-coding upstream 107740 72429808 ~ 72432696 (+)
G1407323 NA non-coding upstream 111392 72426596 ~ 72429044 (+)
G1407359 NA non-coding upstream 134886 72405112 ~ 72405550 (+)
G1407453 NA non-coding downstream 54566 72597357 ~ 72701589 (+)
G1407430 NA non-coding downstream 75847 72618638 ~ 72619634 (+)
G1407472 NA non-coding downstream 114219 72657010 ~ 72657362 (+)
G1407485 LOC106566365 non-coding downstream 128480 72671271 ~ 72683597 (+)
G1407488 NA non-coding downstream 135197 72677988 ~ 72678350 (+)
G1407199 LOC106566391 other upstream 260881 72216313 ~ 72279555 (+)
G1407190 NA other upstream 436595 72103386 ~ 72103841 (+)
G1406555 NA other upstream 1124009 71413557 ~ 71416427 (+)
G1406510 NA other upstream 1283459 71255979 ~ 71256977 (+)
G1406509 NA other upstream 1288792 71251074 ~ 71251644 (+)
G1407509 NA other downstream 223111 72765902 ~ 72769218 (+)
LOC110492598 LOC106566362 other downstream 265939 72808730 ~ 72818165 (+)
LOC110491159 LOC105013496 other downstream 282730 72824995 ~ 72894201 (+)
G1407566 NA other downstream 369192 72911983 ~ 72929719 (+)

Expression


Co-expression Network