Gene
RNA
| Item | Value |
|---|---|
| gene id | G1407430 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 72618638 ~ 72619634 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1607716 | True | 897 | lncRNA | 0.36 | 2 | 72618638 | 72619634 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491175 | LOC106566388 | coding | upstream | 199278 | 72371494 ~ 72419360 (+) |
| LOC110492916 | LOC106592833 | coding | upstream | 285306 | 72236985 ~ 72333332 (+) |
| LOC110492683 | nattl | coding | upstream | 353883 | 72263336 ~ 72264755 (+) |
| LOC118939586 | NA | coding | upstream | 355431 | 72235921 ~ 72263207 (+) |
| LOC110492682 | LOC106592833 | coding | upstream | 369132 | 72246162 ~ 72249506 (+) |
| ngrn | ngrn | coding | downstream | 22247 | 72641881 ~ 72646008 (+) |
| sypl2b | LOC106566367 | coding | downstream | 82804 | 72702438 ~ 72709614 (+) |
| LOC118939587 | NA | coding | downstream | 86699 | 72706333 ~ 72707004 (+) |
| amigo1 | LOC106566368 | coding | downstream | 134449 | 72754083 ~ 72768074 (+) |
| LOC118939588 | NA | coding | downstream | 146908 | 72766542 ~ 72769227 (+) |
| G1407433 | NA | non-coding | upstream | 75847 | 72540436 ~ 72542791 (+) |
| G1407371 | NA | non-coding | upstream | 109477 | 72441633 ~ 72509161 (+) |
| G1407367 | NA | non-coding | upstream | 181627 | 72435238 ~ 72437011 (+) |
| G1407366 | NA | non-coding | upstream | 185942 | 72429808 ~ 72432696 (+) |
| G1407323 | NA | non-coding | upstream | 189594 | 72426596 ~ 72429044 (+) |
| G1407472 | NA | non-coding | downstream | 37376 | 72657010 ~ 72657362 (+) |
| G1407485 | LOC106566365 | non-coding | downstream | 51637 | 72671271 ~ 72683597 (+) |
| G1407488 | NA | non-coding | downstream | 58354 | 72677988 ~ 72678350 (+) |
| G1407493 | NA | non-coding | downstream | 69026 | 72688660 ~ 72693547 (+) |
| G1407500 | NA | non-coding | downstream | 92196 | 72711830 ~ 72712090 (+) |
| G1407199 | LOC106566391 | other | upstream | 339083 | 72216313 ~ 72279555 (+) |
| G1407190 | NA | other | upstream | 514797 | 72103386 ~ 72103841 (+) |
| G1406555 | NA | other | upstream | 1202211 | 71413557 ~ 71416427 (+) |
| G1406510 | NA | other | upstream | 1361661 | 71255979 ~ 71256977 (+) |
| G1406509 | NA | other | upstream | 1366994 | 71251074 ~ 71251644 (+) |
| G1407509 | NA | other | downstream | 146268 | 72765902 ~ 72769218 (+) |
| LOC110492598 | LOC106566362 | other | downstream | 189096 | 72808730 ~ 72818165 (+) |
| LOC110491159 | LOC105013496 | other | downstream | 205887 | 72824995 ~ 72894201 (+) |
| G1407566 | NA | other | downstream | 292349 | 72911983 ~ 72929719 (+) |
