G1407493


Basic Information

Item Value
gene id G1407493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 72688660 ~ 72693547 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1607788
caactgtcatgttgtcttgtctctgtcctttcccttcaccctgtctccctctgctggtcgttgttatgttaccttttctccccctcttttccccagctgtgccttgtctcctcctaattacccattcaccccgttccccacctgttccctttttccctctgattaggtccctatatctctctctgtttctgctcctgtccttgtcggattcttgtttgtttgtttgtgtgtctcatgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1607788 True 238 lncRNA 0.49 2 72688660 72693547

Neighbor

gene id symbol gene type direction distance location
ngrn ngrn coding upstream 42652 72641881 ~ 72646008 (+)
LOC110491175 LOC106566388 coding upstream 269300 72371494 ~ 72419360 (+)
LOC110492916 LOC106592833 coding upstream 355328 72236985 ~ 72333332 (+)
LOC110492683 nattl coding upstream 423905 72263336 ~ 72264755 (+)
LOC118939586 NA coding upstream 425453 72235921 ~ 72263207 (+)
sypl2b LOC106566367 coding downstream 8891 72702438 ~ 72709614 (+)
LOC118939587 NA coding downstream 12786 72706333 ~ 72707004 (+)
amigo1 LOC106566368 coding downstream 60536 72754083 ~ 72768074 (+)
LOC118939588 NA coding downstream 72995 72766542 ~ 72769227 (+)
LOC110492598 LOC106566362 coding downstream 120800 72808730 ~ 72818165 (+)
G1407485 LOC106566365 non-coding upstream 5063 72671271 ~ 72683597 (+)
G1407488 NA non-coding upstream 10310 72677988 ~ 72678350 (+)
G1407472 NA non-coding upstream 31298 72657010 ~ 72657362 (+)
G1407430 NA non-coding upstream 69026 72618638 ~ 72619634 (+)
G1407433 NA non-coding upstream 145869 72540436 ~ 72542791 (+)
G1407500 NA non-coding downstream 18283 72711830 ~ 72712090 (+)
G1407501 NA non-coding downstream 18901 72712448 ~ 72712702 (+)
G1407502 NA non-coding downstream 23231 72716778 ~ 72716979 (+)
G1407503 NA non-coding downstream 47676 72741223 ~ 72741727 (+)
G1407505 NA non-coding downstream 57322 72750869 ~ 72751192 (+)
G1407199 LOC106566391 other upstream 409105 72216313 ~ 72279555 (+)
G1407190 NA other upstream 584819 72103386 ~ 72103841 (+)
G1406555 NA other upstream 1272233 71413557 ~ 71416427 (+)
G1406510 NA other upstream 1431683 71255979 ~ 71256977 (+)
G1407509 NA other downstream 72355 72765902 ~ 72769218 (+)
LOC110491159 LOC105013496 other downstream 131974 72824995 ~ 72894201 (+)
G1407566 NA other downstream 218436 72911983 ~ 72929719 (+)
G1408176 NA other downstream 732200 73425747 ~ 73426266 (+)

Expression


Co-expression Network