Gene
RNA
| Item | Value |
|---|---|
| gene id | G1407989 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 72961549 ~ 72961915 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1608384 | True | 367 | lncRNA | 0.46 | 1 | 72961549 | 72961915 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491158 | LOC106566369 | coding | downstream | 31783 | 72904370 ~ 72929766 (-) |
| LOC110492692 | LOC106566365 | coding | downstream | 277922 | 72646017 ~ 72683627 (-) |
| LOC110492693 | LOC105029198 | coding | downstream | 320176 | 72620726 ~ 72641373 (-) |
| LOC110492690 | LOC106566363 | coding | downstream | 350302 | 72540435 ~ 72611247 (-) |
| hspa1b | LOC106566386 | coding | downstream | 421524 | 72536428 ~ 72540025 (-) |
| LOC110492600 | LOC106566373 | coding | upstream | 78620 | 73040535 ~ 73047672 (-) |
| si:ch211-150o23.3 | LOC106566377 | coding | upstream | 130506 | 73092421 ~ 73100266 (-) |
| LOC110491162 | LOC106566379 | coding | upstream | 153508 | 73115423 ~ 73144288 (-) |
| LOC110492609 | LOC106566381 | coding | upstream | 185381 | 73147296 ~ 73167393 (-) |
| LOC118939590 | NA | coding | upstream | 272601 | 73222996 ~ 73236615 (-) |
| G1407979 | NA | non-coding | downstream | 11041 | 72947609 ~ 72950508 (-) |
| G1407968 | NA | non-coding | downstream | 38870 | 72920388 ~ 72922679 (-) |
| G1407948 | NA | non-coding | downstream | 95827 | 72856062 ~ 72865722 (-) |
| G1407936 | NA | non-coding | downstream | 110353 | 72844386 ~ 72851196 (-) |
| G1407991 | NA | non-coding | upstream | 4344 | 72966259 ~ 72966470 (-) |
| G1408524 | NA | non-coding | upstream | 65070 | 73026985 ~ 73027963 (-) |
| G1408560 | NA | non-coding | upstream | 86269 | 73048184 ~ 73050071 (-) |
| G1408561 | NA | non-coding | upstream | 106447 | 73068362 ~ 73070422 (-) |
| G1408513 | NA | non-coding | upstream | 121862 | 73083777 ~ 73090354 (-) |
| G1407755 | NA | other | downstream | 523702 | 72435429 ~ 72437847 (-) |
| G1407628 | NA | other | downstream | 628834 | 72331806 ~ 72332715 (-) |
| G1406752 | NA | other | downstream | 1415704 | 71501118 ~ 71547366 (-) |
| G1406760 | NA | other | downstream | 1418080 | 71539958 ~ 71543469 (-) |
| G1406514 | NA | other | downstream | 1700732 | 71260322 ~ 71260817 (-) |
| G1408615 | NA | other | upstream | 268897 | 73230812 ~ 73232954 (-) |
| ppdpfb | LOC106566296 | other | upstream | 807941 | 73769856 ~ 73777432 (-) |
| rps21 | LOC106572905 | other | upstream | 1210958 | 74172873 ~ 74182639 (-) |
| G1409044 | NA | other | upstream | 1233610 | 74195525 ~ 74195951 (-) |
| G1409407 | NA | other | upstream | 1774518 | 74736433 ~ 74739189 (-) |
