XLOC_033072 (mustn1a)


Basic Information

Item Value
gene id XLOC_033072
gene name mustn1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40841156 ~ 40842768 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064265
CAAACACCAGCAGCACAAACCAAAAACAGTTTTCATTACTGAGCTGCTGGAACTAATTGAAGATGTCATCTTCAAACAACAATGTGTCTATCCTACAGCAACAACAGTGACTGAGATTAAATGGGAGGAGGAACCGTGTGACTCACACTTTGGCCAAAGGAATTATGGCCCATTTGGGATTGGACTCTGGGAAGGGACGAGTTTGCGTGAggatataaagcatataaacGCACACGGGACGAGTATAAAACAGAAACTTCAGCAAGACTGCAGGACCATGTCTCAACTGGGCGAACAAGAGGAAGTGAAGAGGCCTGAGGTGAAAACGGAGGATTTGATTGGAGCCAGAGATAAACTTGCATCTGGAACTGAGGTGAAGAGCAAGACTTTTGAGGTGATGCAGGAATGTGAACGAGCTGGGAAAGCCGCTCCATCCGTCTTCAGCAACGTTCGCTCAGGATCAGAGACTGCCTTTAACAAACCCACCAAGAGGAAGTAACACTGTAGGACCATTCTGTTTTACTGGATCATACTGCTGAAACACGTGGTACAAATTAAGACTgtaggaaaataaaaaaataaaaaagtctaaaaaaaa

Function

symbol description
mustn1a Acts upstream of or within cilium assembly. Located in nucleus. Is expressed in several structures, including Kupffer's vesicle; head; otic vesicle; pectoral fin bud; and segmental plate. Orthologous to human MUSTN1 (musculoskeletal, embryonic nuclear protein 1).

GO:

id name namespace
GO:0002062 chondrocyte differentiation biological_process
GO:0044782 cilium organization biological_process
GO:0042246 tissue regeneration biological_process
GO:0060271 cilium assembly biological_process
GO:0035988 chondrocyte proliferation biological_process
GO:0005634 nucleus cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-111129-3 Acts upstream of or within cilium assembly. Located in nucleus. Is expressed in several structures, including Kupffer's vesicle; head; otic vesicle; pectoral fin bud; and segmental plate. Orthologous to human MUSTN1 (musculoskeletal, embryonic nuclear protein 1).

Ensembl:

ensembl_id ENSDARG00000054026

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064265 True 598 mRNA 0.44 3 40841156 40842768

Neighbor

gene id symbol gene type direction distance location
XLOC_033071 eefsec coding downstream 8911 40822587 ~ 40832245 (-)
XLOC_033070 CR450814.1 coding downstream 21390 40795898 ~ 40819766 (-)
XLOC_033067 arpc4 coding downstream 62862 40743367 ~ 40778294 (-)
XLOC_033069 h1-10 coding downstream 69343 40769517 ~ 40771813 (-)
XLOC_033068 myhb coding downstream 85018 40745437 ~ 40756138 (-)
XLOC_033073 rft1 coding upstream 1018 40843786 ~ 40854458 (-)
XLOC_033074 NA coding upstream 13371 40856139 ~ 40864078 (-)
XLOC_033075 sirt4 coding upstream 34626 40877394 ~ 40922971 (-)
XLOC_033076 CR293534.1 coding upstream 103589 40946357 ~ 40946475 (-)
XLOC_033077 NA coding upstream 120918 40963686 ~ 40968341 (-)
XLOC_033062 CR450814.2 non-coding downstream 173693 40667347 ~ 40667463 (-)
XLOC_033061 NA non-coding downstream 179832 40659954 ~ 40661324 (-)
XLOC_033060 dre-mir-200c non-coding downstream 184868 40656204 ~ 40656288 (-)
XLOC_033059 dre-mir-141 non-coding downstream 185071 40656003 ~ 40656085 (-)
XLOC_033085 NA non-coding upstream 608902 41451670 ~ 41452888 (-)
XLOC_033102 NA non-coding upstream 2214694 43057462 ~ 43072882 (-)

Expression


Co-expression Network