G1408517


Basic Information

Item Value
gene id G1408517
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 73113416 ~ 73115117 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1609059
CTAGAATACCCTGGACACTAGAATACCGTGAACACTAGAATACCGTGAACACTAGAATACCCTGGACACTAGAATACTGTCGACACTAGAATACCGTGAACACTAGAATACTGTCGACACTAGAATACCGTGAACACTGTAGAATACTGTGGACATTAGAATACTGTGAACATTAAAATACTGTGGGCGCAGCCTCCCGTCACCACAGACCCAGGTTTGATCCCAGTGTGTAtcccaaccggccgtgaccgcgagtcccatagggtggcgcgcaattggcccagcgtcgtctgggtttaggggagggtttggccgggtggcctttacttggctcatttgcgctctagcgactccttgtggcgggccgggcacctgcaggaTGACctcagtcgtcagttgaacagtgttttctctgacacattggtgcggctggcttcctggttaagcGGGCTGGTGATTAAAAAGCGCAGTATTCGGGTCATGTTTCGCCTCTCCGGAACCCGTTGGGGAGTTGAAGCGATGAGACGATCGCTATTGGATATCACCAAAAGGGgggaaaatac

Function

NR:

description
PREDICTED: UDP-N-acetylglucosamine transporter-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1609059 True 563 lncRNA 0.52 2 73113416 73115117

Neighbor

gene id symbol gene type direction distance location
si:ch211-150o23.3 LOC106566377 coding downstream 13150 73092421 ~ 73100266 (-)
LOC110492600 LOC106566373 coding downstream 65744 73040535 ~ 73047672 (-)
LOC110491158 LOC106566369 coding downstream 183650 72904370 ~ 72929766 (-)
LOC110492692 LOC106566365 coding downstream 429789 72646017 ~ 72683627 (-)
LOC110492693 LOC105029198 coding downstream 472043 72620726 ~ 72641373 (-)
LOC110491162 LOC106566379 coding upstream 306 73115423 ~ 73144288 (-)
LOC110492609 LOC106566381 coding upstream 32179 73147296 ~ 73167393 (-)
LOC118939590 NA coding upstream 119399 73222996 ~ 73236615 (-)
LOC110492449 LOC106572884 coding upstream 595012 73710129 ~ 73742096 (-)
ppdpfb LOC106566296 coding upstream 655065 73769856 ~ 73777432 (-)
G1408573 NA non-coding downstream 11705 73101419 ~ 73101711 (-)
G1408571 NA non-coding downstream 18672 73094047 ~ 73094744 (-)
G1408513 NA non-coding downstream 23062 73083777 ~ 73090354 (-)
G1408561 NA non-coding downstream 42994 73068362 ~ 73070422 (-)
G1408596 NA non-coding upstream 50463 73165580 ~ 73166585 (-)
G1408606 NA non-coding upstream 73228 73188345 ~ 73188550 (-)
G1408609 NA non-coding upstream 81286 73196403 ~ 73199380 (-)
G1407755 NA other downstream 675569 72435429 ~ 72437847 (-)
G1407628 NA other downstream 780701 72331806 ~ 72332715 (-)
G1406752 NA other downstream 1567571 71501118 ~ 71547366 (-)
G1406760 NA other downstream 1569947 71539958 ~ 71543469 (-)
G1406514 NA other downstream 1852599 71260322 ~ 71260817 (-)
G1408615 NA other upstream 115695 73230812 ~ 73232954 (-)
rps21 LOC106572905 other upstream 1057756 74172873 ~ 74182639 (-)
G1409044 NA other upstream 1080408 74195525 ~ 74195951 (-)
G1409407 NA other upstream 1621316 74736433 ~ 74739189 (-)

Expression


Co-expression Network