G1408615


Basic Information

Item Value
gene id G1408615
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 73230812 ~ 73232954 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1609186
tctctctctctgtctctctctcgctctctctccctctcttgctctctctccctctctgtctctctctctctctccctctctgtctctttctctgtctctctctctcagataccGATAAGCTTTATTTGCATAAATGACAAGACCACTGTTGCTAAAGCGAAGGAAGATAATGATATCAACAATAACAGCACCAAATGGATAATATGAATGGTCATTAGGGAAAGataaatatatacactgagtgtacaaaacattaagaacaccttccaaatattgagttggTTTTTGAAGTGGGGGAGACCTATCTTTTtttcaatgtattttttatttttttcatctagttggataaacactccaaacagcctacccgaccgcttGGAGGCGTCCCCAAGGTCCTAAAGCACAGCGTAGCCTCATTTTATATCACATTCCATGGTGTGCCCACTACCATACCACATTCAAAGGaaattcaatattttgtctttcccattcaccatcataatggcacacatacacaatccatgactCAATTGTCTAAAGGCTTTAAagatccttctttaacctttctcctcaccctttaaCAAGTGacgataagggatcatagcgttcacctggattcacctggtcagtcagtgtcatggaaagagtaggtgttcctaatgttttgtacactcagtgtttatacatatgtacaaaacatttggaaaatataaatataaaaaaatatatataataatttaatCTAAAAAGCgcttttctctctcatctctctctctttcctgtctcaTTCCTCAGTCCTAATCATCTTTCTGCAAACAATGGCAGCTATATGTTCCACACCAACTATACACTGTCATATCAGATGTGTTCTACACTGTCAGATCAGATGTATTCTACACTGTCAGATCAGATGTGTTCTACACTGTCAGATCAGATGTGTTCTACACTGTCATATCAGATGTGTTCTACACCAACTACACTATACACTGTCAGATCAGATGTGTTCTACACTGTCAGATCAGATGTGTTCTACACTGTCATATCAGATGTGTTCTACACTGTCAGATCAGATGTGTTCCACACTGTCAGATCAGATGTGTTCTACACTGTCAGATCAGATGTGTTCTACACTGTCAGATCAGATGTGTTCTACACTGTCAGATCAGATGTGTTCTACACTGTCAGATCAGATGTGTTCTACACTGTCAGATCAGATGTGTTCTACACTGTCAGATCAGATGTGTTCTACACTGTCATATCAGATGTGTTCTACACTGTCAGATCAGATGTGTTCTACACTGTCATATCAGATGTGT

Function

NR:

description
PREDICTED: extensin-1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1609186 True 1316 TUCP 0.39 3 73230812 73232954

Neighbor

gene id symbol gene type direction distance location
LOC110492609 LOC106566381 coding downstream 63419 73147296 ~ 73167393 (-)
LOC110491162 LOC106566379 coding downstream 86524 73115423 ~ 73144288 (-)
si:ch211-150o23.3 LOC106566377 coding downstream 130546 73092421 ~ 73100266 (-)
LOC110492600 LOC106566373 coding downstream 183140 73040535 ~ 73047672 (-)
LOC110491158 LOC106566369 coding downstream 301046 72904370 ~ 72929766 (-)
LOC118939590 NA coding upstream 1562 73222996 ~ 73236615 (-)
LOC110492449 LOC106572884 coding upstream 477175 73710129 ~ 73742096 (-)
ppdpfb LOC106566296 coding upstream 537228 73769856 ~ 73777432 (-)
LOC110492451 LOC106566294 coding upstream 550045 73782999 ~ 73822236 (-)
LOC110492453 LOC106566293 coding upstream 599914 73832868 ~ 73867578 (-)
G1408618 NA non-coding downstream 5756 73224744 ~ 73225056 (-)
G1408613 NA non-coding downstream 13061 73217360 ~ 73217751 (-)
G1408612 NA non-coding downstream 13827 73216512 ~ 73216985 (-)
G1408611 NA non-coding downstream 19999 73210459 ~ 73210813 (-)
G1408609 NA non-coding downstream 31432 73196403 ~ 73199380 (-)
G1408621 NA non-coding upstream 6324 73239278 ~ 73240134 (-)
G1408622 NA non-coding upstream 10141 73243095 ~ 73243345 (-)
G1408623 NA non-coding upstream 11543 73244497 ~ 73244867 (-)
G1408625 NA non-coding upstream 13141 73246095 ~ 73246681 (-)
G1408628 NA non-coding upstream 16398 73249352 ~ 73250128 (-)
G1407755 NA other downstream 792965 72435429 ~ 72437847 (-)
G1407628 NA other downstream 898097 72331806 ~ 72332715 (-)
G1406752 NA other downstream 1684967 71501118 ~ 71547366 (-)
G1406760 NA other downstream 1687343 71539958 ~ 71543469 (-)
G1406514 NA other downstream 1969995 71260322 ~ 71260817 (-)
rps21 LOC106572905 other upstream 939919 74172873 ~ 74182639 (-)
G1409044 NA other upstream 962571 74195525 ~ 74195951 (-)
G1409407 NA other upstream 1503479 74736433 ~ 74739189 (-)
G1409430 LOC106566333 other upstream 1612150 74845104 ~ 74847937 (-)

Expression


Co-expression Network