G1408099


Basic Information

Item Value
gene id G1408099
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 73255776 ~ 73256928 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1608508
cccaatcagagaccactatgatgacacaccaaatgatgaccaccaatcagagaccactttgatgacacaccaaatgatgaccaccaatcagagaccactatgatggcacaccaaatgatgaccccccaatcagagaccactttgatgacacaccaaatgatgaccaccaatcagagaccactttgattacacaccaaatgatgaccaccaatcagagaccactatgatgacacaccaaatgatgacccaCCATCCAGAGACCActttgatgacacaccaaatgatgacccccaatcagagaccactttgatgacacaccaaatgatgacccccaatcagagaccactatgatgacacaccaaatgatgacccccaatcagagaccactatgatgacacaccaaatgatgaccccccaatcagagaccactatgatgacacaccaaatgatgacccccaatcagagaccactatgatgacacaccaaatgatgaccaccaaacagagaccactttgatgacacaccaaatgatgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1608508 True 535 lncRNA 0.46 2 73255776 73256928

Neighbor

gene id symbol gene type direction distance location
LOC118939466 NA coding upstream 53443 73201944 ~ 73202333 (+)
LOC110492608 LOC106566378 coding upstream 142786 73098625 ~ 73112990 (+)
LOC118939589 NA coding upstream 171313 73083043 ~ 73084463 (+)
LOC110492603 LOC106566376 coding upstream 172842 73076716 ~ 73082934 (+)
LOC110492602 LOC106566374 coding upstream 179248 73072507 ~ 73076528 (+)
LOC110492610 LOC106566382 coding downstream 1214 73258142 ~ 73280340 (+)
LOC110491163 LOC106566383 coding downstream 31912 73288840 ~ 73318587 (+)
LOC110491178 LOC106572904 coding downstream 67174 73324102 ~ 73662832 (+)
LOC118939591 LOC106566297 coding downstream 491557 73748485 ~ 73768113 (+)
trnae-cuc-170 NA coding downstream 520829 73777757 ~ 73777828 (+)
G1408055 NA non-coding upstream 26212 73226955 ~ 73229564 (+)
G1408079 NA non-coding upstream 61907 73189106 ~ 73193869 (+)
G1408002 LOC106566381 non-coding upstream 88455 73159027 ~ 73167321 (+)
G1408067 NA non-coding upstream 90479 73164826 ~ 73165297 (+)
G1408062 NA non-coding upstream 98056 73156038 ~ 73157720 (+)
G1408104 NA non-coding downstream 9278 73266206 ~ 73267592 (+)
G1408130 NA non-coding downstream 79204 73336132 ~ 73336414 (+)
G1408136 NA non-coding downstream 97669 73354597 ~ 73354851 (+)
G1408138 NA non-coding downstream 98477 73355405 ~ 73355639 (+)
G1408139 NA non-coding downstream 99744 73356672 ~ 73356872 (+)
G1407566 NA other upstream 326057 72911983 ~ 72929719 (+)
LOC110491159 LOC105013496 other upstream 372250 72824995 ~ 72894201 (+)
LOC110492598 LOC106566362 other upstream 439053 72808730 ~ 72818165 (+)
G1407509 NA other upstream 486558 72765902 ~ 72769218 (+)
ngrn ngrn other upstream 610912 72641881 ~ 72646008 (+)
G1408176 NA other downstream 168819 73425747 ~ 73426266 (+)
G1408313 NA other downstream 512918 73769846 ~ 73773319 (+)
G1408335 NA other downstream 546203 73803131 ~ 73804334 (+)
G1410289 NA other downstream 2688608 75945536 ~ 75945963 (+)

Expression


Co-expression Network