Gene
RNA
| Item | Value |
|---|---|
| gene id | G1408104 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 73266206 ~ 73267592 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1608513 | False | 264 | lncRNA | 0.47 | 2 | 73266206 | 73266605 |
| TU1608514 | True | 407 | lncRNA | 0.48 | 3 | 73266206 | 73267592 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939466 | NA | coding | upstream | 63873 | 73201944 ~ 73202333 (+) |
| LOC110492608 | LOC106566378 | coding | upstream | 153216 | 73098625 ~ 73112990 (+) |
| LOC118939589 | NA | coding | upstream | 181743 | 73083043 ~ 73084463 (+) |
| LOC110492603 | LOC106566376 | coding | upstream | 183272 | 73076716 ~ 73082934 (+) |
| LOC110492602 | LOC106566374 | coding | upstream | 189678 | 73072507 ~ 73076528 (+) |
| LOC110491163 | LOC106566383 | coding | downstream | 21248 | 73288840 ~ 73318587 (+) |
| LOC110491178 | LOC106572904 | coding | downstream | 56510 | 73324102 ~ 73662832 (+) |
| LOC118939591 | LOC106566297 | coding | downstream | 480893 | 73748485 ~ 73768113 (+) |
| trnae-cuc-170 | NA | coding | downstream | 510165 | 73777757 ~ 73777828 (+) |
| LOC118939592 | NA | coding | downstream | 560466 | 73827832 ~ 73833251 (+) |
| G1408099 | NA | non-coding | upstream | 9278 | 73255776 ~ 73256928 (+) |
| G1408055 | NA | non-coding | upstream | 36642 | 73226955 ~ 73229564 (+) |
| G1408079 | NA | non-coding | upstream | 72337 | 73189106 ~ 73193869 (+) |
| G1408002 | LOC106566381 | non-coding | upstream | 98885 | 73159027 ~ 73167321 (+) |
| G1408067 | NA | non-coding | upstream | 100909 | 73164826 ~ 73165297 (+) |
| G1408130 | NA | non-coding | downstream | 68540 | 73336132 ~ 73336414 (+) |
| G1408136 | NA | non-coding | downstream | 87005 | 73354597 ~ 73354851 (+) |
| G1408138 | NA | non-coding | downstream | 87813 | 73355405 ~ 73355639 (+) |
| G1408139 | NA | non-coding | downstream | 89080 | 73356672 ~ 73356872 (+) |
| G1408141 | NA | non-coding | downstream | 92769 | 73360361 ~ 73360902 (+) |
| G1407566 | NA | other | upstream | 336487 | 72911983 ~ 72929719 (+) |
| LOC110491159 | LOC105013496 | other | upstream | 382680 | 72824995 ~ 72894201 (+) |
| LOC110492598 | LOC106566362 | other | upstream | 449483 | 72808730 ~ 72818165 (+) |
| G1407509 | NA | other | upstream | 496988 | 72765902 ~ 72769218 (+) |
| ngrn | ngrn | other | upstream | 621342 | 72641881 ~ 72646008 (+) |
| G1408176 | NA | other | downstream | 158155 | 73425747 ~ 73426266 (+) |
| G1408313 | NA | other | downstream | 502254 | 73769846 ~ 73773319 (+) |
| G1408335 | NA | other | downstream | 535539 | 73803131 ~ 73804334 (+) |
| G1410289 | NA | other | downstream | 2677944 | 75945536 ~ 75945963 (+) |
