G1408139


Basic Information

Item Value
gene id G1408139
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 73356672 ~ 73356872 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1608565
tctctctctcctccctctgtctcctcctcagtctctctctctctctcctcctctgtctcctgcctctgtctcctcctcagtctctctctcctcctctgtctcctcctctctctcgtcccctgtctcctccctctgtctcctcccactctctcctcctctgccttcctttctcttcctccctctttctcctcctcccgctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1608565 True 201 lncRNA 0.59 1 73356672 73356872

Neighbor

gene id symbol gene type direction distance location
LOC110491163 LOC106566383 coding upstream 38085 73288840 ~ 73318587 (+)
LOC110492610 LOC106566382 coding upstream 76332 73258142 ~ 73280340 (+)
LOC118939466 NA coding upstream 154339 73201944 ~ 73202333 (+)
LOC110492608 LOC106566378 coding upstream 243682 73098625 ~ 73112990 (+)
LOC118939589 NA coding upstream 272209 73083043 ~ 73084463 (+)
LOC118939591 LOC106566297 coding downstream 391613 73748485 ~ 73768113 (+)
trnae-cuc-170 NA coding downstream 420885 73777757 ~ 73777828 (+)
LOC118939592 NA coding downstream 471186 73827832 ~ 73833251 (+)
adrm1 adrm1 coding downstream 512416 73869288 ~ 73879109 (+)
LOC110516815 syp coding downstream 1422174 74779046 ~ 74814478 (+)
G1408138 NA non-coding upstream 1033 73355405 ~ 73355639 (+)
G1408136 NA non-coding upstream 1821 73354597 ~ 73354851 (+)
G1408130 NA non-coding upstream 20258 73336132 ~ 73336414 (+)
G1408104 NA non-coding upstream 89080 73266206 ~ 73267592 (+)
G1408099 NA non-coding upstream 99744 73255776 ~ 73256928 (+)
G1408141 NA non-coding downstream 3489 73360361 ~ 73360902 (+)
G1408116 NA non-coding downstream 5506 73362378 ~ 73362826 (+)
G1408151 NA non-coding downstream 23629 73380501 ~ 73380785 (+)
G1408152 NA non-coding downstream 24041 73380913 ~ 73381153 (+)
G1408154 NA non-coding downstream 28510 73385382 ~ 73385732 (+)
G1407566 NA other upstream 426953 72911983 ~ 72929719 (+)
LOC110491159 LOC105013496 other upstream 473146 72824995 ~ 72894201 (+)
LOC110492598 LOC106566362 other upstream 539949 72808730 ~ 72818165 (+)
G1407509 NA other upstream 587454 72765902 ~ 72769218 (+)
ngrn ngrn other upstream 711808 72641881 ~ 72646008 (+)
G1408176 NA other downstream 68875 73425747 ~ 73426266 (+)
LOC110491178 LOC106572904 other downstream 303623 73324102 ~ 73662832 (+)
G1408313 NA other downstream 412974 73769846 ~ 73773319 (+)
G1408335 NA other downstream 446259 73803131 ~ 73804334 (+)
G1410289 NA other downstream 2588664 75945536 ~ 75945963 (+)

Expression


Co-expression Network