XLOC_033077


Basic Information

Item Value
gene id XLOC_033077
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40963686 ~ 40968341 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065216
TGAAGTGATGACCGCCAGGAAGAAAATTCtcaaatacagttttattttatacCCATCTCTGTGCCAAATAGACAGAGACACGAAAAACAGTGTACAAAAACAAACATCAATAGAAAAGTATGCTTATATCCAAATGTCCAAAAATTGATCAACGCCGTGACATAAATTGCAGAGAAACAACATTTtgtcagaaaacaaacaaacaaaaaaaggtagAATACCAAACATGTACAAATGTACACTTCTCTATGTGCATGTCTTTATACAAAAGTGTCAATGCAACTCTGTTTGTATATGGGTTCTTTTTAAAGATAGGTCCtttaaatgacagatttttccTACCCATCGCTGTTCACAATCAGTACTGGGAAGGCACTTTGCAACATACAAGTAATTGAATATATAAGCTAGAAAAAAAAACGTTTCCAGTGATGTAATAAGCCAGAACACCTTACTAGACAAACAtagaataacattaataataataataataggaaaaaaaaatcaaaccattTTTAATTGGTAAATAAATAAGGGCTGCAAATATTCAGATCACACTATGATGCCAGGCAGATGATGATTGTTACTATTAAAAGaataatatttcaattaaaacatgttaaattagCAATGATTAGTCAAATAAGTGAGCATACTCGGCATAGTCCACTGCTCAGATCAGCCTGCTTTAGATTTTACATGTTAACAGAAAGGAAATTCACTGACAGCTTCCATCATGAATGACAAACTGCCCTTCCAAATACATATAAGTTGATGGGAGACTATACAAATAACCTGCAGGGTAAAGTAAAGGGAAATATAACCAGCATTAACACTGCATTCAGAGGAACAGGCTaacaccaaacacacactcaattaCTTGCATAATAATAATCAAGACACAACAAAAGTGTGGATGTGTCATTATCCACTTAAAACAAgtatttaaagcataaaaacgTCCATTCGTTCATTCAAAGCCCAGAAAAATATCTATTTACAAGGATCCCGTTCACAAAAACTAACATAATTggccatacatatatacatatttgctttatatatatatatatatatgaatgttatACGTCATGTATAGTGACAAGAATTTAAGTTAAGCAGGAATGTATTGAACCACTTAGAAAAACTCTGGTATatttaagaaaagaaaagattACAAAGCCCTCTGTTTATATTACATTCTAGAGATAAAGGACATCAGAGAGATCGCAGCATACACTCGTGTTACACAAACACACGTCATCACACTCACGCTCTCCTCCTGTCGGCTGcatgatttaaaaaggaaaaaaaaagcatgttgcAACAACTCAATATATAtacctttttgtaaaggagactTGGACACTGGTAtcaataagttaataaaatatattctttgcTTCTTGCTATATCTTACAGTGAAACCTGAATTTGGTCCCTGTTGGACGTTAAAAACAGACACACATCTCGTGACCAAAAGCAATCTGTTTCAGTACTATCCAAGacaaacaaagcacaaaataTTACTGAGATCACAGCCATCGTTTGGCCTTAAGTTTTGAAGGATTTCATTTAAATAACTGACGAAAGTATTTCATACTAAAATGTTGAAGTAGGTGATGTAGGTTTTGTGTCATATATGGAAGCTTGTTTTTTTCCAGAGtaacaaaaataagaaaatgatTTCAATTTTTTTCCTCACAATTCATACTTTTTTCTTGCATGTTTAGATCTTAAAATTAATCATTTCTTCTCAAACTTCAACCTCATAACGGCCAAGTTGGAAAATTTTCCTTCCCCTTAAACTTGATATCTTGAATATTTGGACTTTTCAACATAACACGtcttttaatctaaaaaaaaacaaacaatataattaaTTCATACCTTTTTCTGCAAGAACAGCATGTTTAGATCTTAAACTCAGAATTTTCAACAGAAATTTGGACTTTTCAACATTTAACACATcctttaatcataaaaaaaactacagaattattttttttttccagcaagaACTGCAAGTTTAgatcttaaaatgtataatttcttcTGAAAATTTGTAGTGTAAACCTCACAATAGCCAAGTTGAAAAAAACTTTGCTTTCCCCTCACAACTTTATATATTGGCTTTTTGGACTTTTCAACTTAACACAactttttatcttaaaaaaaaaaaaacaataaaattaattaatcctTTGAACTGCAAATTTAGATCTTGAAATTAATCATTTCTGCTAAAAAATTCTGAATTTTAACCTCACAACAGCCAAGATGGAAAACTTTCCTTTCCCCTCATAAATTTATATCTTGAATTTTTGgactttaaaatttttaacatatctttaataaaaaataaataaaaaataaaataaaaacaaatataattataacAGTACAACTAAGAAAACTTTTTTCTGCAAGAACTTCAAGCTTAGatcttaaaattattaatttcttcTGAAAATTCTGAGTTTAAACCTCACCATAGTCAAGTTGGAAAACATGCAGTTGCAAGAATGAATTAATTCTTTACAAGATTAAAAGGTGTGTTCATAGTTATAAAGTCAAGGTATAAAGTTCTGAGGAAAAAGAAAGTTTTACAACTTGGCTATTGTGAGGAGGCAAAGGCCGACTGGACGATCTGAAAGCCAAAGGATTCAAGAAGTGACATATTCTGTTGGGGGGAAAAGGGTGAGGCGAGGTCTCCAAGACTGGAGGCAGCCGCAGCACGTTTCTTATGGACACGGTGATGGTGCTTGTTGAGGTAAGACTTTGTGCGGAAAGCCTGACCGCATTCGCCACAGGCGAACTTCTTTTCCTGGTCTGTTGTTGGGATGTTTTTGGAGCCCTCTGGTGAGGTCACTGCGTCATCAGGTTGGCCGTTGAAGATGAAGGATGTCACCTCCATTTCTTCTCCCTCAACTTTATGTTCAGCCTTGAGATCCATTCCGTTGGAAAGGTCACCGAAAACTGCATCTGAACCGTCAGAATCCTGATGAGGACATTTCCCAGCATTCTCCTGCCCGTCTGAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065216 True 3041 lncRNA 0.33 2 40963686 40968341

Neighbor

gene id symbol gene type direction distance location
XLOC_033076 CR293534.1 coding downstream 17211 40946357 ~ 40946475 (-)
XLOC_033075 sirt4 coding downstream 40715 40877394 ~ 40922971 (-)
XLOC_033074 NA coding downstream 99608 40856139 ~ 40864078 (-)
XLOC_033073 rft1 coding downstream 109228 40843786 ~ 40854458 (-)
XLOC_033072 mustn1a coding downstream 120918 40841156 ~ 40842768 (-)
XLOC_033078 slc2a11a coding upstream 7314 40975655 ~ 40992683 (-)
XLOC_033079 hdhd3 coding upstream 46450 41014791 ~ 41021880 (-)
XLOC_033080 trub2 coding upstream 55239 41023580 ~ 41028698 (-)
XLOC_033081 rab44 coding upstream 89602 41057943 ~ 41079209 (-)
XLOC_033082 srsf3a coding upstream 111662 41080003 ~ 41091448 (-)
XLOC_033070 CR450814.1 non-coding downstream 143920 40795898 ~ 40819766 (-)
XLOC_033062 CR450814.2 non-coding downstream 296223 40667347 ~ 40667463 (-)
XLOC_033061 NA non-coding downstream 302362 40659954 ~ 40661324 (-)
XLOC_033085 NA non-coding upstream 483329 41451670 ~ 41452888 (-)
XLOC_033102 NA non-coding upstream 2089121 43057462 ~ 43072882 (-)
XLOC_033106 BX927362.1 non-coding upstream 2378588 43346929 ~ 43349086 (-)
XLOC_033111 NA non-coding upstream 3011370 43979711 ~ 44002542 (-)
XLOC_033118 NA non-coding upstream 4955601 45923942 ~ 45929175 (-)

Expression


Co-expression Network