Gene
RNA
| Item | Value |
|---|---|
| gene id | G1408154 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 73385382 ~ 73385732 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1608585 | True | 351 | lncRNA | 0.40 | 1 | 73385382 | 73385732 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491163 | LOC106566383 | coding | upstream | 66795 | 73288840 ~ 73318587 (+) |
| LOC110492610 | LOC106566382 | coding | upstream | 105042 | 73258142 ~ 73280340 (+) |
| LOC118939466 | NA | coding | upstream | 183049 | 73201944 ~ 73202333 (+) |
| LOC110492608 | LOC106566378 | coding | upstream | 272392 | 73098625 ~ 73112990 (+) |
| LOC118939589 | NA | coding | upstream | 300919 | 73083043 ~ 73084463 (+) |
| LOC118939591 | LOC106566297 | coding | downstream | 362753 | 73748485 ~ 73768113 (+) |
| trnae-cuc-170 | NA | coding | downstream | 392025 | 73777757 ~ 73777828 (+) |
| LOC118939592 | NA | coding | downstream | 442326 | 73827832 ~ 73833251 (+) |
| adrm1 | adrm1 | coding | downstream | 483556 | 73869288 ~ 73879109 (+) |
| LOC110516815 | syp | coding | downstream | 1393314 | 74779046 ~ 74814478 (+) |
| G1408152 | NA | non-coding | upstream | 4229 | 73380913 ~ 73381153 (+) |
| G1408151 | NA | non-coding | upstream | 4597 | 73380501 ~ 73380785 (+) |
| G1408116 | NA | non-coding | upstream | 22556 | 73362378 ~ 73362826 (+) |
| G1408141 | NA | non-coding | upstream | 24480 | 73360361 ~ 73360902 (+) |
| G1408139 | NA | non-coding | upstream | 28510 | 73356672 ~ 73356872 (+) |
| G1408158 | NA | non-coding | downstream | 5547 | 73391279 ~ 73391542 (+) |
| G1408176 | NA | non-coding | downstream | 40015 | 73425747 ~ 73426266 (+) |
| G1408183 | NA | non-coding | downstream | 45786 | 73431518 ~ 73433010 (+) |
| G1408214 | NA | non-coding | downstream | 115381 | 73501113 ~ 73501450 (+) |
| G1408222 | NA | non-coding | downstream | 130576 | 73516308 ~ 73520643 (+) |
| G1407566 | NA | other | upstream | 455663 | 72911983 ~ 72929719 (+) |
| LOC110491159 | LOC105013496 | other | upstream | 501856 | 72824995 ~ 72894201 (+) |
| LOC110492598 | LOC106566362 | other | upstream | 568659 | 72808730 ~ 72818165 (+) |
| G1407509 | NA | other | upstream | 616164 | 72765902 ~ 72769218 (+) |
| ngrn | ngrn | other | upstream | 740518 | 72641881 ~ 72646008 (+) |
| LOC110491178 | LOC106572904 | other | downstream | 274763 | 73324102 ~ 73662832 (+) |
| G1408313 | NA | other | downstream | 384114 | 73769846 ~ 73773319 (+) |
| G1408335 | NA | other | downstream | 417399 | 73803131 ~ 73804334 (+) |
| G1410289 | NA | other | downstream | 2559804 | 75945536 ~ 75945963 (+) |
