G1408710


Basic Information

Item Value
gene id G1408710
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 73388869 ~ 73389364 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1609303
GCCAATCACAGTATAAACTCTGAAATAAAACGCATATTCATGGTGTTTATTCATGTCTCAGCCAATCACAGTATAAACTCTGAAATAAAACGCATATTCATGGTGTTTATTCATGTCTCAGCCAATCACAGTATAAACTCTGAAATAAAACGCATATTCATGGTGTTTATTCATGTCTCAGCCAAGCCACACTAACACAGGACAGGGGATCCTTGCTCCCAACATAGCAGCCTTTCTGGTAAAACGACAGAGTAAAGAATATTTCCAGTTGGTTAGAAGAGAACAACAATATACCAGGTAAACATATTGATCAGGTGGATATTGGGAAACAGTTTACGTGTTTTTGAAAGAACAAATATTGTTTATTCAGACGTTGTAGGTTAATGaaataccctgatgaagacagctcggctgtcgaaacgttggtaattaaatttttgcatctgagctcctagaggtgtgcggctctcttttattttcaagttttctactccgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1609303 True 496 lncRNA 0.38 1 73388869 73389364

Neighbor

gene id symbol gene type direction distance location
LOC118939590 NA coding downstream 152254 73222996 ~ 73236615 (-)
LOC110492609 LOC106566381 coding downstream 221476 73147296 ~ 73167393 (-)
LOC110491162 LOC106566379 coding downstream 244581 73115423 ~ 73144288 (-)
si:ch211-150o23.3 LOC106566377 coding downstream 288603 73092421 ~ 73100266 (-)
LOC110492600 LOC106566373 coding downstream 341197 73040535 ~ 73047672 (-)
LOC110492449 LOC106572884 coding upstream 320765 73710129 ~ 73742096 (-)
ppdpfb LOC106566296 coding upstream 380818 73769856 ~ 73777432 (-)
LOC110492451 LOC106566294 coding upstream 393635 73782999 ~ 73822236 (-)
LOC110492453 LOC106566293 coding upstream 443504 73832868 ~ 73867578 (-)
lama5 lama5 coding upstream 489824 73879188 ~ 74155898 (-)
G1408709 NA non-coding downstream 150 73385975 ~ 73388719 (-)
G1408707 NA non-coding downstream 3647 73384922 ~ 73385222 (-)
G1408706 NA non-coding downstream 4135 73384460 ~ 73384734 (-)
G1408701 NA non-coding downstream 10072 73378579 ~ 73378797 (-)
G1408698 NA non-coding downstream 14834 73373750 ~ 73374035 (-)
G1408711 NA non-coding upstream 544 73389908 ~ 73390117 (-)
G1408728 NA non-coding upstream 31194 73420558 ~ 73420915 (-)
G1408730 NA non-coding upstream 33829 73423193 ~ 73424139 (-)
G1408756 NA non-coding upstream 102578 73491942 ~ 73492726 (-)
G1408768 NA non-coding upstream 134661 73524025 ~ 73524325 (-)
G1408615 NA other downstream 155915 73230812 ~ 73232954 (-)
G1407755 NA other downstream 951022 72435429 ~ 72437847 (-)
G1407628 NA other downstream 1056154 72331806 ~ 72332715 (-)
G1406752 NA other downstream 1843024 71501118 ~ 71547366 (-)
rps21 LOC106572905 other upstream 783509 74172873 ~ 74182639 (-)
G1409044 NA other upstream 806161 74195525 ~ 74195951 (-)
G1409407 NA other upstream 1347069 74736433 ~ 74739189 (-)
G1409430 LOC106566333 other upstream 1455740 74845104 ~ 74847937 (-)

Expression


Co-expression Network