G1408158


Basic Information

Item Value
gene id G1408158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 73391279 ~ 73391542 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1608589
GTTCAACATCCGAGTGACCGTTCGTGTCCCAAACGGCTCCCTATATGTAGGGcaccatagggttctggtcaaagtagtgcactatttaggaaaTAGGGGACGCAGACCCGACTGTGTATTTTAACTTTGTAGCTACTTGCCAGCCATGTCAAACTGTTATATTGTTAAGATTGAGTCATGTGTTTGAGGAAATCAAAGCCTCTGAtgtctccttctttccctcctcctcttctttctctcctgctttacaatgctgtttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1608589 True 264 lncRNA 0.44 1 73391279 73391542

Neighbor

gene id symbol gene type direction distance location
LOC110491163 LOC106566383 coding upstream 72692 73288840 ~ 73318587 (+)
LOC110492610 LOC106566382 coding upstream 110939 73258142 ~ 73280340 (+)
LOC118939466 NA coding upstream 188946 73201944 ~ 73202333 (+)
LOC110492608 LOC106566378 coding upstream 278289 73098625 ~ 73112990 (+)
LOC118939589 NA coding upstream 306816 73083043 ~ 73084463 (+)
LOC118939591 LOC106566297 coding downstream 356943 73748485 ~ 73768113 (+)
trnae-cuc-170 NA coding downstream 386215 73777757 ~ 73777828 (+)
LOC118939592 NA coding downstream 436516 73827832 ~ 73833251 (+)
adrm1 adrm1 coding downstream 477746 73869288 ~ 73879109 (+)
LOC110516815 syp coding downstream 1387504 74779046 ~ 74814478 (+)
G1408154 NA non-coding upstream 5547 73385382 ~ 73385732 (+)
G1408152 NA non-coding upstream 10126 73380913 ~ 73381153 (+)
G1408151 NA non-coding upstream 10494 73380501 ~ 73380785 (+)
G1408116 NA non-coding upstream 28453 73362378 ~ 73362826 (+)
G1408141 NA non-coding upstream 30377 73360361 ~ 73360902 (+)
G1408176 NA non-coding downstream 34205 73425747 ~ 73426266 (+)
G1408183 NA non-coding downstream 39976 73431518 ~ 73433010 (+)
G1408214 NA non-coding downstream 109571 73501113 ~ 73501450 (+)
G1408222 NA non-coding downstream 124766 73516308 ~ 73520643 (+)
G1408231 NA non-coding downstream 140429 73531971 ~ 73600024 (+)
G1407566 NA other upstream 461560 72911983 ~ 72929719 (+)
LOC110491159 LOC105013496 other upstream 507753 72824995 ~ 72894201 (+)
LOC110492598 LOC106566362 other upstream 574556 72808730 ~ 72818165 (+)
G1407509 NA other upstream 622061 72765902 ~ 72769218 (+)
ngrn ngrn other upstream 746415 72641881 ~ 72646008 (+)
LOC110491178 LOC106572904 other downstream 268953 73324102 ~ 73662832 (+)
G1408313 NA other downstream 378304 73769846 ~ 73773319 (+)
G1408335 NA other downstream 411589 73803131 ~ 73804334 (+)
G1410289 NA other downstream 2553994 75945536 ~ 75945963 (+)

Expression


Co-expression Network