XLOC_033078 (slc2a11a)


Basic Information

Item Value
gene id XLOC_033078
gene name slc2a11a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40975655 ~ 40992683 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064278
TGGACATTTAAATGAACACAAGCAAGTGCGTTTTATTCATCGGGAGCTCTCAAGAAAATCTGAAAATCAATTATAAAATTGTTTTACTTCATTTAGTCAAGAGGTTTGTTGGTTAAACTATACTGAAATTGCTTACTGGCTGTAACATTTGGAGACGCGTGTCTCACTTATTTTTACGCACCGTCCGCAGAACAGCGATGTCTCATGTAATGGCGAGAACAGAATAAACCCAAAGCTTCTTTCTCTATTTTCTTTGGATTTCAATCTCTGGAATTATCAGCACATTCGAAAGGACAACATGACAACAAAGGAGAAGAAGGGTCATTCATACACTTTGGTTTTAATGGTGACATCTGCAGCGATTGGGGGAACATTACAATATGGATACAACCTGGCCATAATGAATGCACCGACTATTTTTATTCAAAACTTTGTGAATGAGACATTTCAGGAGCGATGGGGAATACAATTGGGGGTTTATGAAGTCACACTCATATGGACCTTTATAGTCTCCATTTTTTCATTGGGGGGCCTTACTGGGGCCCTAATAGCAGGTCCAATGTCTGTACGTTTAGGGAGGAAGAAGACTTTGCTGCTTAACAATGTCTTTCTGTTATCAAGTTCACTGCTTGCACTGCTGAGCCGAACAGCAAAGTCATTTGAGATGATTATTATATCAAGATTTTTAGTTGGAATTAATGCAGGGATCAGTATGAATGTACAGCCTATGTATTTTGGTGAAAGTGCACCAAAGCACTTACGAGGAGCCGTGTCTCTATCCTCTGCTGTATTCACTTCATTTGGACTGGTTTTAGGACAGGTGGTCAGTTTGAGAGAGTTGTTGGGTAGTGAGCCATATTGGCAGTACTTATTGGCAAGTAATGCCATCCCAGGCTTCATCCAGCTCCTCACCTTGCCCTGGTTCCCAGAGAGTCCCCGTTACCTCCTTTTTGACTGTAAAGACAAGGAGGCCTGTCTTTcagCACTGAAGCGTCTGCGAGGCTGTGAGGTGCGGAGAGAAGAGCTGGATGAGCTTCTGCAGGAACAGAATGAAATCAAAAGCGATCGTGCCAAGCAGCCGTGGGATCTGTTGACTGACCGCAGCGTCCGCTGGCAGCTGATCTCGGTGGCCGTCTTGAGCAGTGCCATGCAGCTGTGCGGTAATGATTCGATCTACTTCTATGCATCATATGTCTTCCAAGAAGCGGGTATATCTGCAGGACAGATCCAATATGTGACCATCGGCACCGGGATGTGTGAATTTACTGCTTGCATCCTGTGTaaccTGTTAATAGAAAGGCTGGGTAGGAAGCTGATGTTGATGGGCGGTTATGTTCTGATGACAGGATGGGCTGTAGTCTTCACTGTGGCTCTTTCACTTGAGAATATTGTTACCTGGATGCCTTACCTGAGCATGACCTGCATCTTCACTTACATTCTCAGCTTTGGCATGGGTCCAGCTGGGGTGTCTGTAATCCTTCCGACTGAGATTTTTAACCAGACAGCACGACCTGCGGCCTGCATGACGGCTGGATTTCTAATGTGGCTAAACCTCTTCATCATCGGCATGATCTTCCCTTTCCTTGTGAGTGGTTTAGGACAGTACTGCTTTGTGCCGTTTGGCACTGTATGCCTCGTGACTGCTACATATATTCACATGGTTCTACCCGAAACCAAGGGAAAGACCCTACCCATGATCACTAAAGAGTTTTACAAGCTCAACTACCGTGGACACAGGAAAATGGATTTAGAAGCTTCAAAAGCTCAATATAAACTTGGGGAAATCCTTCACTCCACTGCCTTATAGACTGCTAAATATtctcaacaataaatatatattttagtacaatcattttaaacctttaaCTTCCACTTAAAAAAACTTTGACCAATTTTTAGGTTAAACTATGATAATCCTGATAGCACCCTAAGCAAATTTAGGGTTTTGTGTTTTAATCACAACCCATGGACAAAAGGTCAACCTGACGGTTATGATGCCACTGGGTTAAACATTTGCCTTatagtttgttgtttttgttcaatGCGCCACCTGATGGATGTTCTGTGAACACATTTATTTGAATTCCAAGGAGACTTTTACGGCATACCATGGCTATGCCGTGACAGAAAATGCGGTGAGCCGcggtaaaaaaagcatttttatggAAACATCTATATGCCGAGTTTATACTGcacaattttcaaagtagtcatgtcgcagatgttttcacacagcatgactatctggggtagcattcCGCCACTGCTGCGTTTACACtacaagatggatcggcgacaggggatttcacactgcatgactttaggAGAATTGCCAACAACGCTGTCTTAGTCCACAAACTACGcctcacaaccaaacacaagcGAGAAgtcatatgtaaaaaaaaatgggagGTCATGTAgtatttcttttgttattaaccacTTTATAAGAAGCCTtcagtggggtagaaaatgtacttaatttGGTAACCTTGCTTTTAAagagaattagcaatttctctcaAAAAGACACAGGTGCTGCTGCCAAATTTCCACTCGTTTTTCCTTGATTTCTTGGGTCCAGATAAACTGAAAATAAGCTGTCTTCTCTTTTAACTTCACCCCCAACCTCCCACTGGCCTGTAGATACCCATACTAgaggatgctgctctctcattggctgtagctaATCGCTGATGCTATTTccaattaaaaacacatttcacacagcatgattttatATCGCAGACAGTTCCAGATATTAAGCACACAAAATATCTGACGGGGGGCAGCGACTTatcggtgattctctcagatcgcatctttgtTAGTTTACGTTGTGTGAACAAACACTGATTTGCGTGTGATTCCATGCGTTTGTCGGCAATTTCTCAAAGTCTGTCGGTGAgtcaaaatcatgcagtctgaactcggcattaattGGTCTTCATCCCACTGTTTACATCTTTACTGTGTCTGCAAAGACTGTACAATAGGGCCTATAAGATCCACAATAGACTTTCTGGATGGACACATCATTGTTTTGCTCTGTCACTCTCTAATGCTCCACCATTTCAAAATAACATTATGAACACAGCGATTAAACTGtactatcaaattttaaataggGCTACCTTAGCAGAGCTTTGTGCTTTGGTACAAAATTATACAAGGACCGATCATtccactacactctcagaaatagagGTATGTgatctttttaaaaggtacaaatttgtacctaaagggcCCTACTAATACCTCAAAAGTACATGTTAGTACCTAAAAagaacaaaagtgttcctcttagaATTTGTAGGTACTATAAGCCTTTGAGGTACCagtatggaccctttaggtacaaatgtgtaccttttgaaaaggtaccaccccagtgacagctcacgcacctttatttctgagagtgcagatgTCTAACAAATAGATGTTTGCCATTGccggcttttaaaaactgttatggacagagatctttcttttttgtattcACGAAAGCCTGGAATGAGATCTAACAACATCTATAAACAATACCAACGCagaagctgtttaaaaaaaaatcccatactCGTCATCTGATGATCAACTATCCctgtagccactgagatagtaGCCTGTTTCTCTTTATTTAGTGTGTTTGGTGATTGTTTATACTGTTCTCatgtgttgatggatgagatggTAAGGGTGTCtgtatgtttttatgttctgagtcaggcccgattactatttaatcttttcctgtttaaaaaatataaataaatagtatgtGAACAAAATGAGCCAAGTATGAATTCACAGAATTTCAAAAACTATACCAAAATGACATACTTCTTCTGCTGATATTCTGAAGGGTGCATTTGATGGGGGCCATGGGGCCAATTGGTAGTGAACCAACACAACGGACACTGGCAGGTCACATGATATTGACAACAATCCAAATTACATCCAAAATTCATTAACGGATAATACCGATGTTTAAGCTATTGTATATTGAAAAAATTCTAATTGTAGTGATTTCCACTGTATGTGAATTTGGACAAACCTTGTCCTCCTGTTGTGCTCTTTTTGACTTGtagattaaatattattttctgcatAGGTA
>TCONS_00064279
ATGTCGCCTACTCGACACAAGACGCCATGCGTCGATCCAGGTATTTTGAACTTGACGTCAAACTTGAAAATACATTTTAACTATGCATTGTATTTATCTTATCAGGGTCATTCATACACTTTGGTTTTAATGGTGACATCTGCAGCGATTGGGGGAACATTACAATATGGATACAACCTGGCCATAATGAATGCACCGACTATTTTTATTCAAAACTTTGTGAATGAGACATTTCAGGAGCGATGGGGAATACAATTGGGGGTTTATGAAGTCACACTCATATGGACCTTTATAGTCTCCATTTTTTCATTGGGGGGCCTTACTGGGGCCCTAATAGCAGGTCCAATGTCTGTACGTTTAGGGAGGAAGAAGACTTTGCTGCTTAACAATGTCTTTCTGTTATCAAGTTCACTGCTTGCACTGCTGAGCCGAACAGCAAAGTCATTTGAGATGATTATTATATCAAGATTTTTAGTTGGAATTAATGCAGGtattgtgtttatatgtatttcgCCCATAATAACTGAGATATTGATAATGTTTCTTCCTTTTTCTGTTCAGGGATCATTGTTGGGTAGTGAGCCATATTGGCAGTACTTATTGGCAAGTAATGCCATCCCAGGCTTCATCCAGCTCCTCACCTTGCCCTGGTTCCCAGAGAGTCCCCGTTACCTCCTTTTTGACTGTAAAGACAAGGAGGCCTGTCTTTcagCACTGAAGCGTCTGCGAGGCTGTGAGGTGCGGAGAGAAGAGCTGGATGAGCTTCTGCAGGAACAGAATGAAATCAAAAGCGATCGTGCCAAGCAGCCGTGGGATCTGTTGACTGACCGCAGCGTCCGCTGGCAGCTGATCTCGGTGGCCGTCTTGAGCAGTGCCATGCAGCTGTGCGGTAATGATTCGATCTACTTCTATGCATCATATGTCTTCCAAGAAGCGGGTATATCTGCAGGACAGATCCAATATGTGACCATCGGCACCGGGATGTGTGAATTTACTGCTTGCATCCTGTGTaaccTGTTAATAGAAAGGCTGGGTAGGAAGCTGATGTTGATGGGCGGTTATGTTCTGATGACAGGATGGGCTGTAGTCTTCACTGTGGCTCTTTCACTTGAGAATATTGTTACCTGGATGCCTTACCTGAGCATGACCTGCATCTTCACTTACATTCTCAGCTTTGGCATGGGTCCAGCTGGGGTGTCTGTAATCCTTCCGACTGAGATTTTTAACCAGACAGCACGACCTGCGGCCTGCATGACGGCTGGATTTCTAATGTGGCTAAACCTCTTCATCATCGGCATGATCTTCCCTTTCCTTGTGAGTGGTTTAGGACAGTACTGCTTTGTGCCGTTTGGCACTGTATGCCTCGTGACTGCTACATATATTCACATGGTTCTACCCGAAACCAAGGGAAAGACCCTACCCATGATCACTAAAGAGTTTTACAAGCTCAACTACCGTGGACACAGGAAAATGGATTTAGAAGCTTCAAAAGCTCAATATAAACTTGGGGAAATCCTTCACTCCACTGCCTTATAG

Function

symbol description
slc2a11a Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in central nervous system; heart; integument; kidney; and muscle. Orthologous to human SLC2A11 (solute carrier family 2 member 11).

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080723-20 Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in central nervous system; heart; integument; kidney; and muscle. Orthologous to human SLC2A11 (solute carrier family 2 member 11).

Ensembl:

ensembl_id ENSDARG00000053961

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064278 False 4120 mRNA 0.41 12 40975655 40990473
TCONS_00064279 True 1536 mRNA 0.45 12 40977968 40992683

Neighbor

gene id symbol gene type direction distance location
XLOC_033077 NA coding downstream 7314 40963686 ~ 40968341 (-)
XLOC_033076 CR293534.1 coding downstream 29180 40946357 ~ 40946475 (-)
XLOC_033075 sirt4 coding downstream 52684 40877394 ~ 40922971 (-)
XLOC_033074 NA coding downstream 111577 40856139 ~ 40864078 (-)
XLOC_033073 rft1 coding downstream 121197 40843786 ~ 40854458 (-)
XLOC_033079 hdhd3 coding upstream 22108 41014791 ~ 41021880 (-)
XLOC_033080 trub2 coding upstream 30897 41023580 ~ 41028698 (-)
XLOC_033081 rab44 coding upstream 65260 41057943 ~ 41079209 (-)
XLOC_033082 srsf3a coding upstream 87320 41080003 ~ 41091448 (-)
XLOC_033083 slc6a22.1 coding upstream 126227 41118910 ~ 41138855 (-)
XLOC_033070 CR450814.1 non-coding downstream 155889 40795898 ~ 40819766 (-)
XLOC_033062 CR450814.2 non-coding downstream 308192 40667347 ~ 40667463 (-)
XLOC_033085 NA non-coding upstream 458987 41451670 ~ 41452888 (-)
XLOC_033102 NA non-coding upstream 2064779 43057462 ~ 43072882 (-)
XLOC_033106 BX927362.1 non-coding upstream 2354246 43346929 ~ 43349086 (-)
XLOC_033111 NA non-coding upstream 2987028 43979711 ~ 44002542 (-)
XLOC_033118 NA non-coding upstream 4931259 45923942 ~ 45929175 (-)

Expression


Co-expression Network