XLOC_033081 (rab44)


Basic Information

Item Value
gene id XLOC_033081
gene name rab44
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 41057943 ~ 41079209 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064284
gctagttaTACAAAGTAATTGTTTTCAGTGATTTAATAATGGCAAACTAATCTTTACTTGTGTTCTTTAACTGGCAAAGGCATTGTAAAatctatattttgtattaaattgtatTGTAAGTTTTTGATTGTGATCTGCATTGAAAACCCAGCAGTGCAATCATTTTCAACACggttgtgtgtttttaaattaaagcaGGATTTAAAAGTATTAAGGAGGATTAAAACAAGCACTTGAACTGCAGTCAAAATATTACACTGCAACAAATGTCTCATTCGCTTACACAGGAAGAACGATCAGCAACTTGTCAAAAATATAAACTCAAAAGTTCACACTTGCCTTACAATGCAATTTATGTCAACAGTACAGGAAGTTGAGGGTAGCAGCATAAAGGAAGCTTCATGAGCTTAGCCTCCTtcaaaagagaaacacaaaagcATTGAAGCGTGTCCCGTACTTTACTAAAACCCATGAGACTGTCAAATTGGATGGATTCTTGAGAGGTCATCGGAAGCCATGGAAGAAGGAGGAGAAACCAACTCAATTCCTGAACAAAGTGGCATCAGTGTCATTCCAAGTCCAGTTGTTCAGAGAAGAAAAATAGGCTCAACTCGAAGACCTCTAAAAGGGAATAATGTGACTGCAGAGTCAGATGTGCTTCAAAAAGCCACTTTAGCTGatgcaaaattagaaaaagacaATGTATCTGAAAATACTGAGAGTCTTTCAGCTGTCACCGATTCTAATCTTTTACTTCAACATCATGGCACTGAAGGAGCAGGAGAAACAGACTCAATTCCTAAACAAAGTGGCATCAGCATCATCCCTGGAGATCTTCAAAGAAAAGAGACAAACTTAGAGTCAAGTCCAGTTATTCAGAGAAGAAAAATGGGCTCAACTCGAAGACCTCTCAAAGGAAATAAAGGACAAAGAAAAGGACGAGAGCTTCATGatgaaaatgaaacatttaacaGTGAATTTTTGCTTGATGTACAGAAAGAAACATTCGGTTTGGAGGATGAACCCTGTCCAGATGAATCtacattacaaaacataaaaGATGGAGCTGAAGAACAGGAGAAGGAACTGTGTGTGAAGAATGATGCTAGTCTTGTTGGAGAGTCTGAATCTGCTCTCATTCAGTCATCATACGGTTCAGATTTAGCGTCTGGAGAAACCACTGCATTGAGTGTCTGTAACATCACAGAACCACAAACCCTCACAAAAACTCACGAAGAGGCCTGGGAAATAGTTGGGGATGTTGAAAGAGCAACAGTAGAAGAAGACACAGACTTGCAATCAAAAACCGAGTCACAAAACCAAACATGTGTCTCAATTAGTGAAGCAGAAGAAAACATCCATGATGTAAATGTTTTAGTCAGAGAAGCTGAAGTTACTGGAGAATCAGTTATATTGGATAGTAATGTGACTGCAGAGTCAGATGTGATTCAAAAAGACACTTTAGCTGATGCAGAATTAGAAACATTGCAAGTTTCTGAAAATACAGAGGATGTTTCTGCTGTGACTGATACTGATTTTCTAGTGCAACATCATGGCACTGAACGAGCAGAAGGGACAGACACAATTTCTGTACAAAGTGGCATCAACATCATTCCTAGAGAGTCTCACGGAGAAGAGGCGAACTCAAAGTCGAGTCCAGTTGTTCAGAGGAGAAAAATGGGCTCAACTCGAAGACCTCTCAAAGGAAATAAAGGACAAAGAAAAGGACAAGAGCTTGATGATGAAAAGGAAACATTTCACTGTGAATTTTTGCTTGATGTAGAAAAAGAAACATTTAGTTTGGAGAATGAACCCTGTCCAGATGAATCTACATTACAAAACATGAAAGATGGAGCTGAAGAACAGGAGAAGGAAATATGTCTGGAGAATGATGTTGGTCTTGTTGAAGAGTCTGAATCTGCTCTCATTCAGTCATATAGTTCAGATTTAGTGTCTGAAGAATCCACTGCATTGAGTGTCTGTAACATCACAGAATCACAAACCCTCACAAAAATTCAAGAAGAGTCCTGGGAAATAGTTGGAGATGTTGAAAGAGAATCAGTAGATGGAGATACAGACTTACAATTAGAAACAGAGTCACAAAACCAAACATGTGACTCAACCAGTAAAGCAGAACAAAACATCCATGATGTAAATGTATTAGTCAGAGAAGCTGAAGGTATTGGGGAATCAGTTAAAGTGGACAGCAATGTGATTGCAGAGTCAGATGTGCTTCAAAAAGCCACTTTAGCTGATCCAAAATTGGAAACATTGCACGTATCTGAAAATACTAAGGATGTTTCTGCTGTCACGGATTCTGATCTTCTAGTGCAACATGAACCAACTGTAGAAGCAGGAGAAACAGACACGGTTCCTGAAAAAAGTGGAATCAGCATCATTCCTGGAGATTCTCACAACGAAGAGGCAAACTCAAAGTCAAGTCCAGTTGTTCAGAGGAGAAAAATGGGCTCAACTCGAAGACCTCTCAAAGGAAATAAAGGACAAAGAAAAGGACGAGAGCTTCAAGATGAAAATGAGACACTTAATAATGAAATTAGGTTTGATGTAGAGAAAGAAACATTTGGTTTGGAGAATGAACCCTGTCCAGATGAATCTGCATTACAAAACATAAAAGTTGGAGCTGAAGAACAGGAGAAGGAAATATGTGTGAAGAATGATGCTGGTGTTGTTGAAGAGTATGAATCTGATCTCATTCAGTCATTTTATGGTTCGGATTTAGTGTCTGAAGAATCCACTGCATTAAGTGTCTGCCACATCGAAGAAGCACAAACTCTCACAATTAGTCATGAACAATTTCAGAATAATCCTGGAGATGCAGAAAGAGCAGCAGTAGTTGAAGATGCTGCTGATACTGAAGATACTTCAGAAACTGAAGCTACAGTTACAATGAAGAGCACTACAAATACTGCATCACATGTTTTTCAAACGTCTCCTAGTTCAAGCACAGATGCATTTAATATATCTACAAATGTCGAGGAAGATACTTCAGGAGACACAGACACAATTTTCAAGCAGAGTAACATCAACGTTGTTCATGAAGATATTTATAGAGGGGAAGCTCACCCAAAGTTAAGTCCAGTTGTTCAGAAGAGAAAAATGGGCTCAACTCGAAGACCTCTCAGGGGGAACAAAGGACAAAAAAAAGATAATGATGAAAAGGAAATCTCATTTCTGGAAAATGAACCCAATCCAGATGAGCTTATATACACTGCAATGGGTATCAGTGATATTTCAGAAGCTCAAACCCACGTAAAAGTTCACGAAGAGTCCCAGGACAACCATGAAGTTGTTGAAAAAGCAACAGTAGGGGAAAGCACACAATCACAAACAGAAAACAAAGTGAGTGTGTTAGTCAGAGAAGCTGAAGTTCCTGAAAATACAGTTGTGATTAATACAACTGAGGAGTCGTATTTGTTTCAATACGTCTCTGATTCAAAACTGACCATATCTGACTATGAACATGAGGCTCCAGTAATTCCAAACATAATTTCCAAACAAAGTGACTTCAGCATTCCTGGAGATTCTCACAAAGAAGAGGAAAACTCACAATTAAGTCCAGTTGTTCAAAAGAGAAAAATGGGCTCAACTCGAAGACCTCTCAAAGGGAATAAGGGACAAGGAAAGCAGAGAGAAGAATCCAAGGTAAAGAATAGAGATAATGAGGCAGGGTCAGAAGAGgaaaacacagaaacacattcAAAAGACCAGGAACAAAATGTGGCAAAAGACAATATGAATATAATAGATAATGTCAATGAAGAAAAAAAGGCAACAAAGGCATTGGATACATCCATGCAGGAACTATGTGAACAAGAGCAAAGATCAGATGTATCACAAACACATGCTGATACATCACAGGATGAAACCAGCTCACATTTATTGGACATCCCAGAAAGAACTGTAGATTTTGTTAGGGAGTCTACGAGTCAGCCTGATCTTGTTCTGTCTGATGTGTTGCTTATGACAGAAGCTCAAACGTATTTGTCATCAGAAGATAATGTCATGGGTAACAGTTCAATATCTATAACAGAGGTACATGAAATGCATGCAGACTCCAATACATCCAAGAGAAAAATGGGGTCAACTAGAAAGAGAGGAAAGAGGATGGTGAATGAAGAGGAAGAGGAAGCTGAAAATACAATTGGTTCTGGAGCCACAAGTTCCAAGGAGACATTAACTCCTAAAAAATTAATTGCAGAATCTTCTGTACATAAACCACTGTTTAGTTCATATGTTATTAACGAAGACCATGACAGTAAATCAGATGTGCAGACTGAGCTCTCAGATCAAGATTATCTAAATTCTACCATAAACACCGAACcaatgaaagaaagagaaagttcTCCAGATGTTGTTGCTGAAATGGTTTCTGACTTTGCTTTGGGACATGTTGACACTGAAGTAGTTCCTGAGCAAAGGGTCATTCCTGAAGAGCCACATAAAGATCAAGCAAACCTGAATCCAGTTGTTCAAAAACGAAAAATGGGGTCAACACGTAAAACTCTTAGAGGGAACAAAGGGCAGAGAAAAGAGGAAGAATCGAAAGAAATTAATGAAGGAATGACACAGGATCAGAGTAGAGAACTACATTTGGCAAGTGAAAGTAAACTTGGTGAAGAGGTTCAACAAAACCAATCTCTTATTAATATGACAAACAATAAAGAAGCTAAGAAACCGGAGGATGAATTGGATGAAATGCCTTCAGCATCAAGCATCTCTCAATTCACAGAAGCATCCTCAGAAACTCTCAGTTCCTCATATCTTAAATCAGAAAAGTTAGATTCAAAAGATGAGAATGATTATCATGATACTTGTGAACATGAAAATGCCCATCAGATTTGCGCTGATGCTACCAAAAGTCTACAGTCGGAATCTGTTCCCATTGAGAGGAGAAGGAAGATGGGCTCGACCCGGAAAAATATTGGAAGAGAAGGAAGAATGCAAAGAAAGCGAGATGGATATGAGGACACAGAAATCATAGACACAAATCTGCAGATGTCTCACGACCCTGAAATGAGCTCATCAGGTATAACTGCAGAAGAACAAACAACTGAAGATTACTCCAATCAGTCAGAGGATTCACTTCTTGGTGAAATACAGCGAATGCTAAAAACAACTTCTCAAAGTGCATCCAATTTTGAATTGATTATTGATGAGCCGAAATCAAATTCACCAGAAGGCTCAGAAATCAGATCTCTTTCACCATCACAGAGCTTGACAACTCTAAATGATCCAAACTCTCCAGAAAGACGACGGCGAAAAATGGGTTCAACTCGCAAGAACCCTAAACGGCAGTTCAAAGCAGAAAGAGAAGATGAAGACAAAGTAGATCAGAAGACAGAGTCAAACAAAGAAGAAATAACGGAGGGGTCGCTAGTGCATAATATCACAGAAGACCCTCCAAATAAAGAGTATCTTGATGTTCCCAGTGCACACACAAGCAGCCAGCAAGAAGAGAGCGATAGCCCTGTTGTTCAAGAAAGTGCGTCACCATCAACTAAAAGGAAGTTTGGGTCCAGACGAGCTAATAAGGGCAAACTTGGTAGGCTTGAGGCATCTGATGGTATGACTGAATCAGAAGATGGAGATCATAAACCAGATGGCTCTGCTGTTGAGGACAGACAGCACAGGGATGGTTCAATGgGTTGTGGTACGAGCGTCAGCTTACAACCAGAAAATCTGCCATTTTCCAGAAATTATGAAGTTGCTCCAAAAGGCACTGGTGAAGAGATTCAAGTCAGAAAACAGGACAGAATGACGGTCAATGTAAAGAACAGGGATTCTAAAGTGGTTCAGTTTAATGTGGTCATGGTGGGAAACAGCTGTGTTGGAAAGACGTCCTTCATAAGACGTTTCCATGAAGGCCAGTTCACCGAGGATTACCGCTCCACTATTGGTGTTGACACTTTCGTACAGACTGTTGAGCTGCCCGACAGAACTGTTAAACTGCAGATATGGGACACAGCAGGTCAAGAGAGGTTTCACAGCATCACCACGCAAGTTTTCCACAAGGCTGAGGGGCTTCTGCTCATGTATGAGATCACATGTTCAAAGAGTTTCATTTCTATACGAGATTGGATCTCTCAAGCCCGGGAAAGGGCTCAAGATGATGTCGTCATGATGTTGCTCGGAAACAAGAATGATTCAGTTAATCGTGAAGTCCAGATTCAGGAAGGAGCAGATCTGGCCAGAGAGTATAACATACATTTCATGGAGTGCAGTGCTGCAAACGGGGCTAATGTGTCAGAATCTATGAGGACTCTTGCTGAGTTGTTAGTGCAGCGCAAGAGAAAAAGGGAGGAACACACAACGCTGAGAAGAGAACCACAACAGAAGAAATCTggatgctgttaaaaaaaaactcccaacacatataaacacaacactgttcAAATGTTTGGGTTGGTAAGAATGCGTTAAAATCGATTActgttttttttcataaaatataattcacattattttatatacactcacaggtcactttattaggtacaccttactagtaccaggttagacagacttttgccttcagaacgcccttaatccttcatggcatagattcaacaaggtactggaaatatttctctgagattttggtccattttgacatgatagctttacacagttgctgcagattatttggctgcacatccatgatttgaaattccaccacatcccaaaggttctctattggattgaagtggtggctgtggaggccatttgagtacagtgaactcattgtcatgttcaagaaactcatctgagatgatttgcgctttatgacatgcatttgcgctcacaaaactgccgctcactggatattttttatttttggactaTTCTCTGAAAatcctagagatggctg

Function

symbol description
rab44 Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in several processes, including cellular response to insulin stimulus; protein localization to plasma membrane; and secretion by cell. Predicted to be active in Golgi apparatus; cytoplasmic vesicle; and plasma membrane. Orthologous to human RAB44 (RAB44, member RAS oncogene family).

GO:

id name namespace
GO:0072659 protein localization to plasma membrane biological_process
GO:0006904 vesicle docking involved in exocytosis biological_process
GO:0032869 cellular response to insulin stimulus biological_process
GO:0009306 protein secretion biological_process
GO:0017157 regulation of exocytosis biological_process
GO:0005768 endosome cellular_component
GO:0032593 insulin-responsive compartment cellular_component
GO:0005794 Golgi apparatus cellular_component
GO:0055037 recycling endosome cellular_component
GO:0005886 plasma membrane cellular_component
GO:0008021 synaptic vesicle cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040724-117 Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in several processes, including cellular response to insulin stimulus; protein localization to plasma membrane; and secretion by cell. Predicted to be active in Golgi apparatus; cytoplasmic vesicle; and plasma membrane. Orthologous to human RAB44 (RAB44, member RAS oncogene family).

Ensembl:

ensembl_id ENSDARG00000028389

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064284 True 6889 mRNA 0.40 10 41057943 41079209

Neighbor

gene id symbol gene type direction distance location
XLOC_033080 trub2 coding downstream 29245 41023580 ~ 41028698 (-)
XLOC_033079 hdhd3 coding downstream 36063 41014791 ~ 41021880 (-)
XLOC_033078 slc2a11a coding downstream 65260 40975655 ~ 40992683 (-)
XLOC_033077 NA coding downstream 89602 40963686 ~ 40968341 (-)
XLOC_033076 CR293534.1 coding downstream 111468 40946357 ~ 40946475 (-)
XLOC_033082 srsf3a coding upstream 794 41080003 ~ 41091448 (-)
XLOC_033083 slc6a22.1 coding upstream 39701 41118910 ~ 41138855 (-)
XLOC_033084 synpr coding upstream 143995 41223204 ~ 41229787 (-)
XLOC_033085 NA coding upstream 372461 41451670 ~ 41452888 (-)
XLOC_033086 hemk1 coding upstream 430926 41510135 ~ 41536323 (-)
XLOC_033074 NA non-coding downstream 193865 40856139 ~ 40864078 (-)
XLOC_033070 CR450814.1 non-coding downstream 238177 40795898 ~ 40819766 (-)
XLOC_033062 CR450814.2 non-coding downstream 390480 40667347 ~ 40667463 (-)
XLOC_033102 NA non-coding upstream 1978253 43057462 ~ 43072882 (-)
XLOC_033106 BX927362.1 non-coding upstream 2267720 43346929 ~ 43349086 (-)
XLOC_033111 NA non-coding upstream 2900502 43979711 ~ 44002542 (-)
XLOC_033118 NA non-coding upstream 4844733 45923942 ~ 45929175 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000340_10005818_10020244 NA coding CI01000340 null 10005692 ~ 10020244 (-)